Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1716 ATGGGTGAGTTTCGCGTTCAAGACAAGGAACCTACAAAAAAAACCAACAACAATGGGTCGGTGGAGAGTTTTGAAGGTTTCTCTAATAAGAACATGATGATTCTGCATCACCACCGTTCATTCTTTCATAATGATGATTCTGCTGCTGCTGATGGTTATGGTCCCACAACATACAACATGTCTTTTGGTGGTGATTCTTCTTCTACCATTGATAATGGCGGTGTATCTTTAAATTTCCAACCTTTTCACAACATTTCTGATACAACCTTCAAATCCACAGGTGGAATGGCGGCTTCAATAGGGTATACTCCTTTCACAAGTGCTCAATGGAGAGAGCTTGAAAGACAAGCTATGATTTACAAGTACTTGATGGCTTCTCTTCCTGTTCCTTCTCATCTTCTCTCATTGGATGGTGGTTTCAATTTGAGGCTATCAAGTAGGAACAATACTGATCCAGAGGCAGGTAGGTGCAAAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTTGCTCCTAATAACAAGTACTGTGAAAGACACATGCATAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAACTTCACACCAATAACAATAACCATCAAATCAAAAGGGCTCGTTGTGATTCTAATCCTTTTTCTGTGCCTGATTTTACTGTGGCTGTCCCTAATCCAACAACTACAAGAAAATATGGATCTTCATCACATTTTCTTGCTTCCACTCCTCTTCATCCTTATCTACAATCTTCCTTTTCTTTGCATAATGGCAGCTTTGACTCTTCAAATAAGCAACCAAGGGGCTTGGAGTGGATGCTGAATGGAGATCCAATTTCCCTTGGTGCTTCTAACTCAGGATGGCAGTCTATAATGCATAACAACAAACTTGGAATGGCCAATGAAAGTTCCTATCATAATAACACTGAATCTCAGTATCTGAATTCATTTCCACTATATAACAATTCTGAACTAGCTCAACAAGAAAAACCATTTCCTCTATTACTTAATCCCCTTGTTGCTCCAATGCAAACTCTCCCATCTGAGAAACCAAGAGGTTTTAGTTTCATCGATGCTTGGTCTAATGCAGAGACAGTGGGAAACAATGCCAATGCAAACAACACCAACAATGATTCTGCATCAATTGGTAAATTATCACTTTCATCACTTGATCTGTCAATGGGAGGTAGTGTTGTGAGTGAAGAAATGAGTACTATTGAAATGAATGCTGTGAGTGATGATGATTGTACTAAAACAGCATTCTCAAATTGGCTCAATCCAGCACAATCTTGGGTAGGTTCAACACCTGGTGGTCCACTAGCTGAAGTTCTAAGGCCTAGCAATGTTACCTCCATCAGTGATGCAACAAATTCCAATCCATCTTCACCTCTCACAACAACAAACCGTGTTGAATCTATTGGCACTTTAGGAACAGGAATGGTATCATCTCCATCTGGTGTTTTGCATAATAGAACACTTGCTTCATTTTCTGATAGTAGTGGTAATAGCAGTCCAAATGTTGCATCATCAAGGGTCAATTCTAAGTTCAATCAAATTTCATATGTAAATTAA 1569 0.3945 MGEFRVQDKEPTKKTNNNGSVESFEGFSNKNMMILHHHRSFFHNDDSAAADGYGPTTYNMSFGGDSSSTIDNGGVSLNFQPFHNISDTTFKSTGGMAASIGYTPFTSAQWRELERQAMIYKYLMASLPVPSHLLSLDGGFNLRLSSRNNTDPEAGRCKRTDGKKWRCSRDVAPNNKYCERHMHRGRPRSRKPVELHTNNNNHQIKRARCDSNPFSVPDFTVAVPNPTTTRKYGSSSHFLASTPLHPYLQSSFSLHNGSFDSSNKQPRGLEWMLNGDPISLGASNSGWQSIMHNNKLGMANESSYHNNTESQYLNSFPLYNNSELAQQEKPFPLLLNPLVAPMQTLPSEKPRGFSFIDAWSNAETVGNNANANNTNNDSASIGKLSLSSLDLSMGGSVVSEEMSTIEMNAVSDDDCTKTAFSNWLNPAQSWVGSTPGGPLAEVLRPSNVTSISDATNSNPSSPLTTTNRVESIGTLGTGMVSSPSGVLHNRTLASFSDSSGNSSPNVASSRVNSKFNQISYVN* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1716 522 PANTHER GROWTH-REGULATING FACTOR 7 80 510 - -
Mal2g1716 522 Pfam WRC 152 194 IPR014977 -
Mal2g1716 522 SMART QLQ_2 103 139 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal2g1716 522 ProSiteProfiles WRC domain profile. 151 195 IPR014977 -
Mal2g1716 522 MobiDBLite consensus disorder prediction 1 22 - -
Mal2g1716 522 ProSiteProfiles QLQ domain profile. 104 139 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mal2g1716 522 PANTHER - 80 510 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mal2g1716 522 Pfam QLQ 104 134 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1716 Mal-Chr2 20552814 20555168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1716 353 452 GRF Transcription Factor Family AT5G53660 37.069 5.17e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mal2g1716 WRC 2.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1716 - - mtr:MTR_3g092330 850.892