Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1710 ATGTCACATACTACAAGGCAAAACAAGATAACGATGAGTCCAAATGTTGTTCCAAAACATGTTTGTGACACAACTTATACTAAGATTTTTGTTGGAGGATTAGCTTGGGAGACCAAAAGAGACACACTCAAACGTTATTTTGATCAGTTTGGTGATATCTTAGAAGCTGTTGTCATCACTGACAGAACCACTGGAAAATCAAAAGGATATGGCTTTGTTACCTTCAAGGATCCAAATTCTGCTATACTAGCTTGCCAGAATCCTAATCCAGTGATTGATGGAAGAAGAACTAATATTAATCTTGCATATCAAAAATCTGATTCATCTTTAACAGGAAGACAGAAATTCAATAGTCCTTCAAGGAATACTTCACCAGTCCAATTTCAAGGTTCCTCAACTTATTACAATCAACATATACCACAGTATGCATTTCCTTATCCAGTTTTCAGGTACCCTCACCCTGGTTATCTTCGTCCACAAGACACTTATGAAATGAGCTATAATAATGCATATGGTGGTGGACCTCAATTTCCATATCGCTGGTTTCCAGCATATTACCAACCCTTTTATGGCTTTAGTAGACAGTTAATTCCAACAGCATATATGAAAAAGACACAATTCCATGATGTTGTTGGCATATCAGAACCTATTTCACCTTCTACTTCAATTTCCACCACTGGAGTTATCACAGAAACAGTAGCTGCAACAAGAGTGGTAGAACCTCCCAAAGATCAAACATCCTCAGCTTAA 750 0.3733 MSHTTRQNKITMSPNVVPKHVCDTTYTKIFVGGLAWETKRDTLKRYFDQFGDILEAVVITDRTTGKSKGYGFVTFKDPNSAILACQNPNPVIDGRRTNINLAYQKSDSSLTGRQKFNSPSRNTSPVQFQGSSTYYNQHIPQYAFPYPVFRYPHPGYLRPQDTYEMSYNNAYGGGPQFPYRWFPAYYQPFYGFSRQLIPTAYMKKTQFHDVVGISEPISPSTSISTTGVITETVAATRVVEPPKDQTSSA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1710 249 Gene3D - 2 117 IPR012677 -
Mal2g1710 249 CDD RRM_RBM24_RBM38_like 27 102 - -
Mal2g1710 249 SMART rrm1_1 28 100 IPR000504 GO:0003723
Mal2g1710 249 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIF) FAMILY PROTEIN 2 249 - -
Mal2g1710 249 MobiDBLite consensus disorder prediction 108 127 - -
Mal2g1710 249 PANTHER BOULE-RELATED 2 249 IPR037366 GO:0003729
Mal2g1710 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 87 IPR000504 GO:0003723
Mal2g1710 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 104 IPR000504 GO:0003723
Mal2g1710 249 SUPERFAMILY RNA-binding domain, RBD 11 123 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1710 Mal-Chr2 20483609 20485098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1710 23 105 C2H2 Transcription Factor Family AT2G19380 39.759 2.67e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1710 - - cam:101508568 365.54