Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal2g1708 | ATGGCGGTAGCTGAGAATGTTGGAACCAAAATCGATTCTTCCAGTGAGAATTTGGACAACACTGTTGTTTCATCGGACTCAACGACTGAGGTTGAGAAATCCAAACCCAAAACCGATCAGAATCTGAACAACAACAACAACGGTGTGATCAATCATCAACAACAAGAGAGTGTTCCAAATGGTAACCATGGTTTCAAGGCTCATCAAATGGGTCAGATGCATGGTAATGGGGTTCAGAATCAGCATTTGGTTGATGGGTTTGGTGAGAATGGGGGTGAGAGTTTCAAGCGTGAGATGAGGGATTTGGAGGAGTTGTTGTCAAAGCTGAATCCTATGGCTGAGGAATTCGTGCCACCATCACTGATAACTAATTATCATGGCTACTTAGCTGCTGGTGCTGGACCTAATGCTGGGTTTGGTTACCCTAATAACAATTTTATGCTTCAGAATAATTTTGGCAATGCTAATGCTAATAATGGACAGATTAACAGAAGGAGGAAGAATGGCTATAATAATGCTAAGCGAAGAGTGTATCATAAAATGGATATGGAGAAAAGAGAAGAGATGATTCGCAGGACTGTTTATGTGTCTGACATTGATCAACTGGTCACTGAAGAGCAGCTGGCAGCTCTCTTTCTTAACTGCGGCCAGGTTGTTGATTGCCGTGTATGTGGGGATCCCAATTCCATTCTTCGGTTTGCATTCGTTGAGTTTACTGATGAAGTTGGTGCTAGGACTGCTTTGAACCTGTCTGGAACCATGCTCGGGTATTATCCATTGAGAGTGCTACCTTCAAAGACTGCTATTGCACCTGTGAATCCAACATTTTTGCCCAGGTCTGAAGATGAAAGAGAGATGTGCACTAGAACAATTTACTGCACAAATCTCGACAAGAAGCTTACTCAAGCAGATGTCAAGCAGTTCTTTGAATCTATTTGTGGAGAGGTTCAACGCCTGAGGCTTCTTGGGGATTACCATCATTCAACTCGGATTGCTTTTGTGGAGTTTGCAGTGGCTGAGAGTGCAATTGCAGCACTGAGCTGTAGCGGTGTGGTTTTGGGTTCACTGCCTATAAGGGTAAGTCCATCAAAGACACCAGTCCGAGCTCGTGCAGTTCGTACTCCCATGCACTGA | 1134 | 0.44 | MAVAENVGTKIDSSSENLDNTVVSSDSTTEVEKSKPKTDQNLNNNNNGVINHQQQESVPNGNHGFKAHQMGQMHGNGVQNQHLVDGFGENGGESFKREMRDLEELLSKLNPMAEEFVPPSLITNYHGYLAAGAGPNAGFGYPNNNFMLQNNFGNANANNGQINRRRKNGYNNAKRRVYHKMDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFVEFTDEVGARTALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCTRTIYCTNLDKKLTQADVKQFFESICGEVQRLRLLGDYHHSTRIAFVEFAVAESAIAALSCSGVVLGSLPIRVSPSKTPVRARAVRTPMH* | 378 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal2g1708 | 377 | PANTHER | SERINE/ARGININE-RICH SPLICING FACTOR | 1 | 377 | - | - | |
Mal2g1708 | 377 | MobiDBLite | consensus disorder prediction | 8 | 29 | - | - | |
Mal2g1708 | 377 | SUPERFAMILY | RNA-binding domain, RBD | 280 | 370 | IPR035979 | GO:0003676 | |
Mal2g1708 | 377 | PANTHER | POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 12-LIKE | 1 | 377 | - | - | |
Mal2g1708 | 377 | CDD | RRM2_CID8_like | 285 | 366 | IPR034825 | - | |
Mal2g1708 | 377 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 289 | 365 | IPR000504 | GO:0003723 | |
Mal2g1708 | 377 | MobiDBLite | consensus disorder prediction | 38 | 56 | - | - | |
Mal2g1708 | 377 | CDD | RRM1_CID8_like | 190 | 269 | IPR034823 | - | |
Mal2g1708 | 377 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 194 | 257 | IPR000504 | GO:0003723 | |
Mal2g1708 | 377 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 291 | 358 | IPR000504 | GO:0003723 | |
Mal2g1708 | 377 | SUPERFAMILY | RNA-binding domain, RBD | 179 | 269 | IPR035979 | GO:0003676 | |
Mal2g1708 | 377 | SMART | rrm1_1 | 193 | 263 | IPR000504 | GO:0003723 | |
Mal2g1708 | 377 | SMART | rrm1_1 | 290 | 361 | IPR000504 | GO:0003723 | |
Mal2g1708 | 377 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - | |
Mal2g1708 | 377 | Pfam | Ataxin-2 C-terminal region | 106 | 120 | IPR009818 | - | |
Mal2g1708 | 377 | Gene3D | - | 151 | 269 | IPR012677 | - | |
Mal2g1708 | 377 | Gene3D | - | 276 | 371 | IPR012677 | - | |
Mal2g1708 | 377 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 192 | 267 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal2g1708 | Mal-Chr2 | 20443930 | 20448942 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal2g1708 | 191 | 353 | Eukaryotic Initiation Factors Gene Family | AT1G34140 | 28.144 | 2.08e-12 | 66.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal2g1708 | - | - | gmx:100788102 | 562.762 |