Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1695 ATGGGTGAGGTTGTAATGAGTGGTGAGAAAATAGTGAGAGCTGAAGAAGAGGAAGGGAGTGGAACTGAGAGTAGAGGTGGTGGTGAAATGAAAGGGCTTATGAGGTGGGAGAAATTTTTGCCAAAAATGGTTTTGAGGGTGCTTTTGGTTGAAGCTGATGATTGTACAAGACAGATTATAACAGCACTTCTTAGAAAATGCAACTATAAAGTTGCTCCTGTTGCTGATGGCTTGAAGGCATGGGAAATACTCAAAGGAAGACCACGAAGTATCGATCTAATACTTACAGAAGTCGATTTGCCATCCATATCTGGCTATGCACTTCTCACATTAATTATGGAGCATGATATTTGCAAAAGCATCCCTGTCATAATGATGTCGTCGCAAGATTCAGTTAGCACAGTATACAAATGCATGTTGAGAGGTGCAGCTGACTATCTTGTTAAGCCGATTCGAATAAATGAACTAAGGAATTTGTGGCAACATGTTTGGAGAAGACAATCGCCAGCCGCAACCGCTGGCATAAATGGCCCTCAAGATGAAAGTGATACACAACAGAAGGTTGAAGCCACTGCTGAAAACAACGCTGCTAGTAATCGTTCTGGTGGCGATGCTGCTTGCATTCAAAGAAATAAGGACTTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTACAAGGCCAAACATGGAAGCTGAGAGTGGCCTGGTTGATAACATGCAGGAATTTTCTCAGCTGAAATGTGCTGAAGTATATCCAAGTGAAATAAAGACACAAGAACTTGACATTCATTTAGGCCAGGCAGTGATCACGCAGAACAGTCGCGCTGGAGGATTAAGCGTGGCTAACTGCAAAAATGGAGTGGCAAGCACAAATAACTGCAAAAATGGAGAGACAAGCGCAAATAATTGCAAGGACGGCGATGATCAAGAGCATTTTAGGAATGCTAGCATCAGCGGCAAGTTTGACAATTCTCCACAGTTGGATCTTTCTCTTAGAAGCTCTCATCCCAGCAACTTTGAGAAGGATCTCACCGAAGAAAGGCACACCCTTATGCATTCTAATGCTTCAGCTTTCAAGCGGTATACTAACAGGCAATTGCAAGCGCCACCTGCAGTAGTAATTAACTTCTCTGATCAACAAAGAGACCAAAAAACAAATAATGAGAACCATAACTCAGATAGTTCAATACCAAGTATGCAAAAATGTAATAAGTCTCTAGCTACAGCCCAATCAAAAGAATCTGAACTCGCAACTTCACATTCCCCGCAAGGACATTCTCTCCCAATTCCTGTAAAAGGTGTAAGGTTCAATGATCTATGTATGGCCTATGGTTCAGCACTTCCACCAGGGTTTCGTACACAATCAGGTCCACCATCAATGCCAGGTTCAGTTGTGTTTCTCGAACAAAACTTTCAAGCAGATGCATTTTATCAGTCAAACAAAGAAAATAATTCCGAACAGCTTTACGAACCTCGTGGTCCCAATGGAAACAGCACTCGAAACCAAATTGTGTACACACAGGAACACAAGTCAGAACATCCAGAGGATCAAAGACTTATCTCCCCTACAACTGATCAAAGTGTATCCAGTAGTTTCTGTAATAATGGAAATGCAAGCAATTTTAACAGCATTGGTTACGGAAGTAATTGTGGAAGTAGCAGCAATGTTGAACAAGTTGCCACTTTCAGGACAGCAGCAGTTTCAGAGGGCAAGAATGAAGACCTCACAAACGGTGGATATTCAAATCGGTCTATGCTACGAGAAGCAGCTCTAAACAAGTTCCGGTTGAAACGAAAAGAGAGATGCTATGAGAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCTCGAGTGAAAGGACAATTTGTTCGCCAAGCGAATCCTGATTCTCTTTCTGGAGAAAAAGATTGCTAA 1929 0.422 MGEVVMSGEKIVRAEEEEGSGTESRGGGEMKGLMRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAPVADGLKAWEILKGRPRSIDLILTEVDLPSISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHVWRRQSPAATAGINGPQDESDTQQKVEATAENNAASNRSGGDAACIQRNKDLIEKGSDAQSSCTRPNMEAESGLVDNMQEFSQLKCAEVYPSEIKTQELDIHLGQAVITQNSRAGGLSVANCKNGVASTNNCKNGETSANNCKDGDDQEHFRNASISGKFDNSPQLDLSLRSSHPSNFEKDLTEERHTLMHSNASAFKRYTNRQLQAPPAVVINFSDQQRDQKTNNENHNSDSSIPSMQKCNKSLATAQSKESELATSHSPQGHSLPIPVKGVRFNDLCMAYGSALPPGFRTQSGPPSMPGSVVFLEQNFQADAFYQSNKENNSEQLYEPRGPNGNSTRNQIVYTQEHKSEHPEDQRLISPTTDQSVSSSFCNNGNASNFNSIGYGSNCGSSSNVEQVATFRTAAVSEGKNEDLTNGGYSNRSMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQANPDSLSGEKDC* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1695 642 ProSiteProfiles CCT domain profile. 588 630 IPR010402 GO:0005515
Mal2g1695 642 Pfam CCT motif 588 630 IPR010402 GO:0005515
Mal2g1695 642 Gene3D - 43 277 - -
Mal2g1695 642 MobiDBLite consensus disorder prediction 171 204 - -
Mal2g1695 642 PANTHER TWO-COMPONENT RESPONSE REGULATOR 313 619 IPR045279 GO:0009736
Mal2g1695 642 MobiDBLite consensus disorder prediction 390 426 - -
Mal2g1695 642 Pfam Response regulator receiver domain 47 158 IPR001789 GO:0000160
Mal2g1695 642 MobiDBLite consensus disorder prediction 510 532 - -
Mal2g1695 642 PANTHER POPULUS TRICHOCARPA PSEUDO-RESPONSE REGULATOR 5A MRNA 31 286 - -
Mal2g1695 642 MobiDBLite consensus disorder prediction 172 204 - -
Mal2g1695 642 MobiDBLite consensus disorder prediction 382 431 - -
Mal2g1695 642 SUPERFAMILY CheY-like 42 169 IPR011006 -
Mal2g1695 642 CDD psREC_PRR 47 150 - -
Mal2g1695 642 MobiDBLite consensus disorder prediction 614 642 - -
Mal2g1695 642 ProSiteProfiles Response regulatory domain profile. 46 164 IPR001789 GO:0000160
Mal2g1695 642 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 286 IPR045279 GO:0009736
Mal2g1695 642 PANTHER POPULUS TRICHOCARPA PSEUDO-RESPONSE REGULATOR 5A MRNA 313 619 - -
Mal2g1695 642 SMART REC_2 45 160 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1695 Mal-Chr2 20269133 20272654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1695 570 631 Response Regulator Gene Family AT5G24470 70.588 2.92e-20 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mal2g1695 Response_reg 1.9e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1695 K12130 - gmx:100784383 885.56