Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1675 ATGGAGACATCGTCTCTAGATTCGCTTCCGCTAGGGTTCCGATTCCGACCTACGGATGAGGAGCTTATCGATTACTACCTTCGTTCAAAGATCAACGGAGATGATGACAAGGTTTGGGCTATCCGAGAAATCGATGTCTGCAAATGGGAACCATGGGATATGCCCGATTTGTCAGTGATAAAAGACAAGTATCCAGAGTGGTTCTTCTTCTGTCCACAGGATCCAAAATATCCAAATAGACATCGATTCAACAGATCAACCAATCACGGATATTGGAAGTCAACCGGAATCGATCGTAAAATCAAGTCTGGATCCATCGTTATTGGAATGAAGAAAACTTTAGTTTTCTACATTGGTTGTGCATCTAACTGGAAGAGGACTGACTGGGTCATGCACGAGTATCGTGCCACCCTTAAGGAGCTTGATGGGACCAACCCAGGACAGAATGCATATGTGCTCTGTCGAATATTTGATAAAAAGGATGAGAGCCTTAAAGTTTTAAACTGTGGTGAAGGGGAGCAGTCTAATTCAGCTCCAGAAGAAATACAATCTGATCCAGCTCCTATTGCAGTATCCACATCACATGTCAGAGAAGAGGATGATCAGTTGGCCGTTATCCCTGAGATCTCGGAGGAAACCATACCTAATGTACACCTCGATTGGTTCCCATAG 672 0.4405 METSSLDSLPLGFRFRPTDEELIDYYLRSKINGDDDKVWAIREIDVCKWEPWDMPDLSVIKDKYPEWFFFCPQDPKYPNRHRFNRSTNHGYWKSTGIDRKIKSGSIVIGMKKTLVFYIGCASNWKRTDWVMHEYRATLKELDGTNPGQNAYVLCRIFDKKDESLKVLNCGEGEQSNSAPEEIQSDPAPIAVSTSHVREEDDQLAVIPEISEETIPNVHLDWFP* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1675 223 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 2 213 - -
Mal2g1675 223 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Mal2g1675 223 Pfam No apical meristem (NAM) protein 10 135 IPR003441 GO:0003677|GO:0006355
Mal2g1675 223 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Mal2g1675 223 Gene3D NAC domain 18 164 IPR036093 GO:0003677|GO:0006355
Mal2g1675 223 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 2 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1675 Mal-Chr2 20075722 20077035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1675 5 179 NAC Transcription Factor Family AT1G33060 65.714 9.22e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal2g1675 NAM 2.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1675 - - mtr:MTR_3g093040 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2085 8 43472178 43476840 Mal2g1675 2 20075722 20077035 PCT