Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1654 ATGGCTAATAGTCTCCGTGGAGACAATCGTGAAACCATAGTTACTGCTGCAGCCATTTGTGGGAAACAGGGATGGCCAATTCAGGAACCTGATATCATTGTGACGACACCTGCTGCTCTTCTCAATCATGTTGACGTTGACAGAAGACGCCGCATGGAATTTATGCATGGTGTTAAATATGTGGTGTTTGATGAAGCTGATATGCTTCTCTGTGGGAGCTTCCAGAATAAAGTAATCCGCCTGATTAACTTGCTTCGCTATGATGAAAAACTTTTGTCTCGATCAAAAACATCAGTATCAGAGTTGCCAATGAGACTGGAATCTTCTTTGTCGTCCCACAATGCTTCCGAAGGTGAAGAGGAATTTCCAACTGAAGCCATGTCAGACGATGAGGATGATGATAACGAGGATATTGTCATTATTAATAACGAAGCTGAATCTGTCAAGACAACAAGAAGAGACTGGAGAAGAGTGAGGAAACATTTTGAGCGTAGTAAACAGTATGTTTTTGTTGCAGCTACACTTCCGGTGAATGGAAAGAAAACAGCGGGAGCTTTATTGAAACACATGTTTCCTGATGCTGAGTGGGTTAGTGGAAACTATCTTCATCGTCACAATCCAAGATTGAAGCAAAGATGGATAGAAGTGACCGTTGATACACAAGTGAAAGAACTCATAAGGGCTGTGAATCACAGTTTAAAATCGGAAGATTTGGATAATGGTGGTGGCATTCATAGAACAATGGTGTTTGCCAACACTGTTGAGGCTGTTGAAGCTGTGGTGAAGATATTGGGCTATCCTGGGATTGAATGTTTACGTTATCATAAGAATTGCACGTTGGATGAGCGGGCACAAACATTAGTTGATTTCCACGAGAAAGGTGGTGTTCTTGTATGTACTGATGCAGCTGCTCGTGGTGTGGATATTCCAAATGTCTCTCATGTTATTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGGATTGGACGTACAGCTAGAGCCGGTCAAATTGGACTAGTTACCAGCATGTATACCGAATCCAACAGAGAGCTTGTAGATGCAGTTCGTCGTGCAGGGGAACTCGGTCTACCTGTGGAAACCGCATTTAGCAGGAAAAGAGGCTTCCGTAACAAGATCAAAAAGAAAGCAAGAGCTAACAAAGTCAGAGATTCAGCAACCATTGAAGAGAGTCTTACAGCGTGA 1212 0.4266 MANSLRGDNRETIVTAAAICGKQGWPIQEPDIIVTTPAALLNHVDVDRRRRMEFMHGVKYVVFDEADMLLCGSFQNKVIRLINLLRYDEKLLSRSKTSVSELPMRLESSLSSHNASEGEEEFPTEAMSDDEDDDNEDIVIINNEAESVKTTRRDWRRVRKHFERSKQYVFVAATLPVNGKKTAGALLKHMFPDAEWVSGNYLHRHNPRLKQRWIEVTVDTQVKELIRAVNHSLKSEDLDNGGGIHRTMVFANTVEAVEAVVKILGYPGIECLRYHKNCTLDERAQTLVDFHEKGGVLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSMYTESNRELVDAVRRAGELGLPVETAFSRKRGFRNKIKKKARANKVRDSATIEESLTA* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1654 403 MobiDBLite consensus disorder prediction 103 133 - -
Mal2g1654 403 MobiDBLite consensus disorder prediction 103 117 - -
Mal2g1654 403 Gene3D - 9 191 IPR027417 -
Mal2g1654 403 SMART helicmild6 258 338 IPR001650 -
Mal2g1654 403 CDD SF2_C_DEAD 209 347 - -
Mal2g1654 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 355 IPR027417 -
Mal2g1654 403 Gene3D - 210 403 IPR027417 -
Mal2g1654 403 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 373 - -
Mal2g1654 403 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 22 1 373 - -
Mal2g1654 403 Pfam DEAD/DEAH box helicase 28 88 IPR011545 GO:0003676|GO:0005524
Mal2g1654 403 Pfam Helicase conserved C-terminal domain 245 338 IPR001650 -
Mal2g1654 403 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 221 386 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1654 Mal-Chr2 19917564 19926129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1654 152 366 Eukaryotic Initiation Factors Gene Family AT5G11170 27.391 2.87e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1654 - - gmx:100780518 621.313