Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1649 ATGGAAACTCTGAAAACTGCGATTCCAGAAGGACTGAAACAAGTCATCATAGATAGCACTCTAGATTCTCTTCGTGACACATGTTCTTCTCTTCATCACTTTTTTCTTCATTTCGACCCATTTCACAAGATTGTCACTGAACTCGCGGACCCTAGTTATGCTCTGTGTGGTAAGAGTGAAGAAGCTGCGTTGAAATATAAGCAACTTGGTAATCAATGCTTCTCTAATGCTGATTATGCCAAGGCTCTGGATTATTATACTCAGGCATTGCGAAGGGCTCCTTTTGAGGTTGGTGAAAAGGAAAATAATCTGATTGCAAAACTGTATATTAATCGAGCTACTGTATTGCATAAAATGAATCTTTTAGTAGAATGTTTGCGAGACTGTGATCGAGCTCTTCAGATATGTCCAAGCTATTCGAAGGCATGGTACAGGAGAGGAAAGGCAAATGTTTCATTGGGAAATAATAGAGATGCAATCTGTGACTTAAATATAGCCAAGAGTGTTGAATCATCAACAGGTGGGAAGAGACAAATAGAAAGTGAGCTGAAAATTATTTTAGACCAATCCAAGAGCACAAATATAATAGTACAGCCGCAGCATAAGGAGAACAGCTTGAATGCAGTGGGTGAGATGCCTCAAATAAAGCTGCAAAGTGTCTCTACGCCTGATAAAGGAAGAGGCATGGTGCCGTCGTGTGATGTTTCATCAGGGTCGTTGGTTCATGCTGAAGAACCTTATGCTACAATAATATTAAAGCAATGTCGCGAAACTCATTGCCACTATTGCTTGAATGACCTACCTGCGGATAGAGTTCCTTGTATATCATGTTCAATACCGTTGTATTGCTCACACCAATGCCAGGTAAAGGCAGGCGGGAAAATGTTCAGGATTTCCACAGAAGATGATTACATTCTTAAAAACTTACCCAGCGATCTTGGAGAATATGCCGCTGAAGTGATTCAAAACAATGATTGTGAACAAAAGATTGACGATGTTACTGAACATAAACATGAATGTCAAGGGGTACATTGGCCTGCTGTACTGCCTTCTGAGATAGTTTTGGCTGGCAGAATTTTAGCGAAGTTTTTTTCAAAGAGCTTGTCTGGAGATATCACAAGTTTTGTAGAAAAGTTGGAGCTTTCTCATTGTTACGAACATATGCCATTTGAAAGTAAATTGGATTCACATATATACGCCATTGTACTGTTATATTGTCTTAAACACTCTTATGGAACTATGTTTTCCATCAATGGAATCTCTATATCACAGGTGGTCATAGTTATTTCTCAGATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAATAGACGCTCATGGACTATCAGATCAGTCTGGAAGATTTCCATTTCATTCCAGTGTACATTTAACTAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTATAAAGCTGGAAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCACGCACACTCTATTTACGAACAACAAAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTGTCTTATGGTCCGCAGGTTGGGTTGTGGGATTGTAAAGATCGCCAAAATTTTCTCAAAGATGAATACGCATTTCATTGTCAATGTGCTGGTTGTTCAGAAGTCAGTCTATCTGACATCGCCCTCAATGCTTTTCATTGTGTCAACCAAAATTGTTCCGGCGCGGTGTTGGAGAGCAGAGTACTTGAGTGTGAAAAGCAGAAAATCAAACACTTTCCTATTGCCGACAAAGTTATCAAGAATGATGACATCTATGAAGTATGTCTTAATGCATTTAACCAAAATGACGCCTCTATTCATATTCAACCTGGATACTGTTTGAAATGTGGTTCTTACTGTGATCTGGAGTCTTCACGTGCCACAGTTGATAAAGCCTTAATATGCATAAAAAGGCTGCAGGATGCAATATTGTCAAGAGAAATTTCAAATACTTCCATTTCAGACGCCTTGAGATCTCTTCATTTGCTGAGATCAAAATTGCATGCATACAATAAGGTTATTGCAGAGGCAGAAGACAACCTTGCCCAAGCTTTTTGTTTAGTGGGAGAATTACAATTATCTGTGGATCATTGTAAAACATCTATTCAGATTCTGGAGAAGCTATATGATCCAGATGATATTGTTATTGCTTATGAACTTGTGAAGCTTTCATCCGTCCAACTTTCCTTGGGTGACGATAGTGCTATCGACAGCATTAGTCGAATAGGTGCCATTTTCTCACGTTATTATGGACTCCATGCAGACTTGGTCTTTCCCTATCTTCAGTACCTTAGGAGAGAAATTTAG 2337 0.3894 METLKTAIPEGLKQVIIDSTLDSLRDTCSSLHHFFLHFDPFHKIVTELADPSYALCGKSEEAALKYKQLGNQCFSNADYAKALDYYTQALRRAPFEVGEKENNLIAKLYINRATVLHKMNLLVECLRDCDRALQICPSYSKAWYRRGKANVSLGNNRDAICDLNIAKSVESSTGGKRQIESELKIILDQSKSTNIIVQPQHKENSLNAVGEMPQIKLQSVSTPDKGRGMVPSCDVSSGSLVHAEEPYATIILKQCRETHCHYCLNDLPADRVPCISCSIPLYCSHQCQVKAGGKMFRISTEDDYILKNLPSDLGEYAAEVIQNNDCEQKIDDVTEHKHECQGVHWPAVLPSEIVLAGRILAKFFSKSLSGDITSFVEKLELSHCYEHMPFESKLDSHIYAIVLLYCLKHSYGTMFSINGISISQVVIVISQIKVNCMTVVRLKSIDAHGLSDQSGRFPFHSSVHLTSNVEQVRVGKAIYKAGSLFNHSCQPNVHAYFLSRTLYLRTTKVVAAGCQLELSYGPQVGLWDCKDRQNFLKDEYAFHCQCAGCSEVSLSDIALNAFHCVNQNCSGAVLESRVLECEKQKIKHFPIADKVIKNDDIYEVCLNAFNQNDASIHIQPGYCLKCGSYCDLESSRATVDKALICIKRLQDAILSREISNTSISDALRSLHLLRSKLHAYNKVIAEAEDNLAQAFCLVGELQLSVDHCKTSIQILEKLYDPDDIVIAYELVKLSSVQLSLGDDSAIDSISRIGAIFSRYYGLHADLVFPYLQYLRREI* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1649 778 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Mal2g1649 778 Gene3D SET domain 414 520 IPR046341 -
Mal2g1649 778 Gene3D Tetratricopeptide repeat domain 40 195 IPR011990 GO:0005515
Mal2g1649 778 Pfam SET domain 226 521 IPR001214 GO:0005515
Mal2g1649 778 ProSiteProfiles SET domain profile. 215 521 IPR001214 GO:0005515
Mal2g1649 778 SUPERFAMILY TPR-like 63 720 IPR011990 GO:0005515
Mal2g1649 778 SMART tpr_5 63 96 IPR019734 GO:0005515
Mal2g1649 778 SMART tpr_5 140 173 IPR019734 GO:0005515
Mal2g1649 778 SMART tpr_5 685 718 IPR019734 GO:0005515
Mal2g1649 778 SMART tpr_5 106 139 IPR019734 GO:0005515
Mal2g1649 778 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 777 - -
Mal2g1649 778 Gene3D Tetratricopeptide repeat domain 528 777 IPR011990 GO:0005515
Mal2g1649 778 Coils Coil 670 690 - -
Mal2g1649 778 SUPERFAMILY SET domain 220 546 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal2g1649 SET 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1649 K24634 - gmx:100783548 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1649 2 19844881 19857434 Mal2g1649 2 19844881 19857434 ECH