LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g1646	ATGGAGGAGGTGATATTTTTTGCTATGAAACTAGCTTCTTCACTTGCTATTGTGGGTATTTTCAGCTGGATGATTTATGTTTATGGCAATTTGTGGTATAACTCACAAAGGGTAAGAAGGAAGCTCCGAATGCAAGGTATTAGAGGACCTCCACCTTCTTCTTTTCTACAGGGGAATCTACTTGATATGCAGAAAATCAAATCACAAGCTAGCTTTTCCAAAGATAATGATCAGTTTCTAGCATATGATTACTCTGCAGCTCTGTTCCCATATTTTCAACACTGGAGGAAAAAATATGGTCTAGTGTACACTTACTCCACAGGGATGAAGCAACATTTATATGTGAACGAACCGGATCTAGTGAGAGAAATGAACCAGTGTATCACTTTGAATTTGGGTAAACCTTCTTATATAACTAACAAACTTTCGCCAATGCTTGGTAATGGCATTTTGAGAGCCAATGGTCATAGTTGGGCGCAACAAAGGAAACTTGTTGCAGCTGAGTTCTTCATGGACAAAGTTAAGGGTATGGTGGGCCTTATGATAGAAGCAGCACAGCCATTACTATTAAAATGGGAACAAATTATTGAGGACCAAGGAGGTGCAAAAGCTGAAGTTAAAGTTGATGCTGATTTGAGGAGCTTTTCAGCTGATGTTATTTCAAGGGTTTGTTTTGGACATTCTTATTCCAAAGGAAAGGAAGTTTTCTTAAAGCTTAGAAGCATCCAAAAGATCATGTCCAACCATGGCTTCCTTTTTGGACAGAGCGGCTTCCTGGAGAAACTGAAATTTCGAACAAAGAAGGAAAATGAGATAAGCAGTTTGGAGAGCGAGATAGAGTCACTGATATGGGAGTTAGTGGAGGAGCGTAAGCGAGAATGCTCATCAGAAAAGGATTTGATGCAGTTACTTCTGGAAGCAGCCATGAGTGATCAAAGTTTGGGGAAGGACTTCTCGAAGCAATTCATTGTGGATAACTGCAAAAACATATACTTTGCTGGTCATGAAACTACTGCTGTTGCAGCTTCTTGGTGTTTGATGCTTCTTGCTTTATACCCTGAATGGCAAGACCGTATTAGGACAGAGGTTGCTCAACATTGCGTCAATGGCATACCTGATGCAGATTCTCTCCCTCTTTTGAAAACGGTAACTATGGTGATTCAAGAGGTGCTAAGATTATACCCACCAGCAGCCTTTGTGTCAAGGGAGGCATATGAAGATATCCAAATTGGAAACCTGAATGTTCCCAAAGGTGTTTGTTTATGGACTCTGATACCAACTTTGCACAGAGATCCTGAAATTTGGGGACCAGATTCCAATGAGTTTAAACCAGAAAGGTTCAATGAGGGTGTCTCTAAGGCTATCAAATTTCCACAAGCGTATGTGCCATTCGGAATAGGCACTCGGTTGTGCGTGGGGAAGAACTTTGCAATGGTTGAACTGAAGGTTGTGCTAGCACTTATTGTCTCCAAGTTCAGCTTCTCTTTGTCTCCTAGTTATAAGCATTCTCCTGCATACAATATGATTGTTGAGCCAGGACATGGTGTGTATATTCTCATTCAGAAGAACTGA	1572	0.4084	MEEVIFFAMKLASSLAIVGIFSWMIYVYGNLWYNSQRVRRKLRMQGIRGPPPSSFLQGNLLDMQKIKSQASFSKDNDQFLAYDYSAALFPYFQHWRKKYGLVYTYSTGMKQHLYVNEPDLVREMNQCITLNLGKPSYITNKLSPMLGNGILRANGHSWAQQRKLVAAEFFMDKVKGMVGLMIEAAQPLLLKWEQIIEDQGGAKAEVKVDADLRSFSADVISRVCFGHSYSKGKEVFLKLRSIQKIMSNHGFLFGQSGFLEKLKFRTKKENEISSLESEIESLIWELVEERKRECSSEKDLMQLLLEAAMSDQSLGKDFSKQFIVDNCKNIYFAGHETTAVAASWCLMLLALYPEWQDRIRTEVAQHCVNGIPDADSLPLLKTVTMVIQEVLRLYPPAAFVSREAYEDIQIGNLNVPKGVCLWTLIPTLHRDPEIWGPDSNEFKPERFNEGVSKAIKFPQAYVPFGIGTRLCVGKNFAMVELKVVLALIVSKFSFSLSPSYKHSPAYNMIVEPGHGVYILIQKN*	524

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mal2g1646	523	PRINTS	P450 superfamily signature	333	350	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal2g1646	523	PRINTS	P450 superfamily signature	471	482	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal2g1646	523	PRINTS	P450 superfamily signature	462	471	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal2g1646	523	PRINTS	P450 superfamily signature	385	396	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal2g1646	523	Pfam	Cytochrome P450	83	506	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal2g1646	523	Coils	Coil	265	292	-	-
Mal2g1646	523	PANTHER	CYTOCHROME P450 FAMILY MEMBER	8	519	-	-
Mal2g1646	523	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	464	473	IPR017972	GO:0005506\|GO:0016705
Mal2g1646	523	PANTHER	CYTOCHROME P450 714A1-RELATED	8	519	-	-
Mal2g1646	523	Gene3D	Cytochrome P450	31	523	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g1646	Mal-Chr2	19809472	19815018	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g1646	120	520	Cytochrome P450	AT5G24900	57.353	1.37e-177	504

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g1646	K20661		-	gmx:100815776	860.522

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g1646	2	19809472	19815018	Mal2g1646	2	19809472	19815018	ECH

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