Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1637 ATGATTCCTCGCACGTACCATCGGTTTCGGGCTGGTTCTGATGAAGAGGACGGTTCTTCTTCGCGGAATGTGATGATGTCTGAAGAGGCTCGCCGTGATATTGCGGCGGAGAGAGTTCCTTTAGTGCCTTTAGTTGATGTTGTCGGTGGAGTTAGGGATGGCTTCTCTAACTATTCGTGGTTTGATTTTCAGCAGATTGCAAAGTTTGTTGATCAGATTCTTCCTTTTACTCTCCTGTTTTTGATTGTTTTCATCCGCCGGCATTTGCAAGGTTTCTTTGTCACAATCAGTGTATCAGCTATAATGTTCAAGTCAAATGAAATTGTTAAGAAACAGACTGCTCTGAAGGGAGATCAGAAAGTCTCCGTTCTTCTTGGTATCTCTTTTTTCTTCATGCTGTACGTGATATGCATTTACTGGTGGTATCGAAATGATGATGTTTTATTCCCTCTGGCCATGCTTCCGCCAGAAGCAACACCATCTTTCTGGCATGCAATATTCATCATTTTGGTTAATGATACATTGGTGCGGCAAGCGGCAATGGCTTTCAAGTGTTTGTTGCTGGTTTACTACAAAAATGGCAGAGGCTATAACTTCCGTCTACAGGCTCAAATGTTAACTCTGGTTGAGTACACACTGCTGCTATATCGTGCTTTCTTGCCAGCACCAGTTTGGTACCGATTTTTCTTTAACAAGGACTTTGAAAGTCTCTTCTCATCAATAATCACAGGATTGTATCTAACATTCAAACTAACATCTGGAGTTGAGAAGGTCACATGCTTCATGTTTGCCTTAAAAGCATTAGCAAAAAGGGAAATTCATTATGGTGTTTATGCTACAACAGAACAGGTAAGTGCTGCTGGTGATCTGTGCGCTATATGCCAAGAGAAGATGCATGCTCCTATCCTTTTGCGCTGTAATCACATGTTCTGCGAGGAGTGTGCATCCGAATGGTTTGAGAGAGAATGGACTTGCCCGTTGTGCAGGACATTTGTAAAATTTACTCATCTGCGGACCTTTGGAGATGGATCAACAAGTTTGTTTTATCAGTTGTTTTGA 1059 0.4202 MIPRTYHRFRAGSDEEDGSSSRNVMMSEEARRDIAAERVPLVPLVDVVGGVRDGFSNYSWFDFQQIAKFVDQILPFTLLFLIVFIRRHLQGFFVTISVSAIMFKSNEIVKKQTALKGDQKVSVLLGISFFFMLYVICIYWWYRNDDVLFPLAMLPPEATPSFWHAIFIILVNDTLVRQAAMAFKCLLLVYYKNGRGYNFRLQAQMLTLVEYTLLLYRAFLPAPVWYRFFFNKDFESLFSSIITGLYLTFKLTSGVEKVTCFMFALKALAKREIHYGVYATTEQVSAAGDLCAICQEKMHAPILLRCNHMFCEECASEWFEREWTCPLCRTFVKFTHLRTFGDGSTSLFYQLF* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1637 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 338 IPR013083 -
Mal2g1637 352 SMART ring_2 291 328 IPR001841 -
Mal2g1637 352 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 17 352 IPR044235 GO:0061630|GO:1904294
Mal2g1637 352 ProSitePatterns Zinc finger RING-type signature. 306 315 IPR017907 -
Mal2g1637 352 Pfam Zinc finger, C3HC4 type (RING finger) 289 332 - -
Mal2g1637 352 ProSiteProfiles Zinc finger RING-type profile. 291 329 IPR001841 -
Mal2g1637 352 SUPERFAMILY RING/U-box 281 335 - -
Mal2g1637 352 CDD RING-HC_RNFT1_like 290 329 - -
Mal2g1637 352 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 17 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1637 Mal-Chr2 19730705 19736304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1637 13 352 C3H Transcription Factor Family AT5G01960 59.838 4.64e-164 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1637 - K22379 gmx:100784614 518.85