Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1627 ATGAATGTTATTTTACCTGAAACTATCTCTGCCAACAAAAAGAAGCTACTCATAAAGGAGCTTCTTCAGGGTAAAGAATATGCTACTCAGCTAAAAGTTTTGCTTAAGAATTCTGTTGGCTCTGATGGGTCTTCTTCTGTTAAGGAATTGATGACTAATGTGTTGAGATCTTTCTCTGAGACTATTTCTGTGATGACTTCTTCTGAAGCTTGTAGTATTGATGAGGTTCCTCATTCACAAGATGGTTCATTGGTTGCAGCTTCATGTAATGATGATATGAAATCTGAAGATTCAAGTGAGAGTAGGAAGAGATTGTCTCCTACAACCAAAGATCGAAGAGGTTCCTACAAAAGAAGGAAGACAGATGAGACAAGGACAATAGTCTCTAAAACTACCGGTGACACTCATTCTTGGAGAAAGTACGGACAGAAGGAAATCCTGAATTCTAATTTCCCTAGGAGTTACTTCAGGTGCACCCGAAAGCATGATCAAGGTTGCAAAGCAACCAAACAGATACTAATTGGGATTCAACTCTTGTGA 540 0.387 MNVILPETISANKKKLLIKELLQGKEYATQLKVLLKNSVGSDGSSSVKELMTNVLRSFSETISVMTSSEACSIDEVPHSQDGSLVAASCNDDMKSEDSSESRKRLSPTTKDRRGSYKRRKTDETRTIVSKTTGDTHSWRKYGQKEILNSNFPRSYFRCTRKHDQGCKATKQILIGIQLL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1627 179 MobiDBLite consensus disorder prediction 93 128 - -
Mal2g1627 179 Gene3D WRKY domain 114 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal2g1627 179 MobiDBLite consensus disorder prediction 90 128 - -
Mal2g1627 179 Pfam WRKY DNA -binding domain 134 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g1627 179 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 5 172 - -
Mal2g1627 179 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 172 IPR044810 GO:0003700
Mal2g1627 179 SUPERFAMILY WRKY DNA-binding domain 130 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal2g1627 179 ProSiteProfiles WRKY domain profile. 134 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g1627 179 SMART WRKY_cls 132 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1627 Mal-Chr2 19631800 19633831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1627 13 172 WRKY Transcription Factor Family AT3G56400 48.795 1.73e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal2g1627 WRKY 1.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1627 - - gmx:100778162 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1627 2 19631800 19633831 Mal8g2161 8 45936801 45953066 ECH
Mal2g1627 2 19631800 19633831 Mal2g1627 2 19631800 19633831 ECH
Mal8g2161 8 45936801 45953066 Mal2g1627 2 19631800 19633831 PCT