Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1624 ATGGAAGCTTCATCCAAAATGAGTGTTGTGAGAGTTTTTCTCTTGTGCTTGTTCTTGCTGTTTCTGGTGACTTTGACAGCTGTGACAGCTGTTAATCCGTCTTTAAACGACGACGTTTTGGGGTTAATTGTGTTCAAAGCGGATATACAAGATCCAAAGGGAAAGTTAACATCTTGGAATGAAGATGATGAAAGTGCTTGTAGTGGAAGTTGGGTTGGTGTGAAATGTAACCCTAGATCCAATAGGGTTGTTGAGGTTAATCTTAATGGGTTTTCTTTGTCTGGAAGAATTGGTCGTGGGTTGCAACGTTTGCAGTTTCTTCGTCGGCTTTATTTGGCTAATAATAATCTTACTGGGAGTATAAATGCAAATATTGCTACTATTGATAACCTTAGGGTTCTTGATTTGAGTAACAATAATCTCTCAGGGGTTGTTTCTGATGATTTTTTTAGACAATGTGGGTCTATGAGAGTTGTTTCTTTGGCTAGGAACAGGTTTTCTGGAAATGTTCCTTCTAGTTTAGGTTCATGTGCAGCTATTGCTACTATTGATTTGTCTTTTAACCAGTTTTCGGGGAATGTTCCGAAGGAGATTTGGAGTTTGAGTGGACTTAGGTCACTTGATTTGTCTGATAATTTGTTGGAAGGTGAGGTTCCGAAAGGTGTTGAAGCGATGAAGAATTTGCGGAGCATTAACTTGGCGAGGAATAGCTTTTCTGGGAAGATACCAGATGGGTTTGGAAGTTGCTTGCTTTTGAGGTCTATTGATTTTGGTGATAATTCTTTCTCTGGTAGTGTACCTAGTGATTTGAAGGAATTGGTGTTGTGTGGTTACTTTAGTTTACGTGGAAACGCTTTCTCAGGGGATGTTCCGGATTGGATTGGAGAGATGAAGGGTCTTCAGACATTGGATCTTTCGCTGAATAGATTTTCTGGTTTGGTGCCAAACACTTTAGGAAATCTTTGGTCATTGAAGACGTTGAATCTTTCTGGAAATGGTTTCACTGGTAATCTTCCCGAGTCTATGGTGAATTGCACAAACCTCTTGGCCTTGGATGTTAGCCAGAATTCATTATCTGGAAATCTTCCGTCATGGATTTTCAGGTCGGATTTGGAGAAGGTTATGGTGGTTAAAAGCAGAATGGTTGGTAGGGTGGAAAGCCCTTTGTATTCCTTGACTGAAGCTTCTGTTCAGAGCCTTCAAGTTTTGGATTTATCACACAATGCATTTTCTGGTGAAATTACTTCTGCTGTTTCGGGTTTAAGCAGCTTGCAAGTTTTGAATTTATCATTTAACCTTCTTGGAGGTCATATTCCGGCTGCAATTGGTGATTTGAAAACATGTTCTAGTCTTGATTTGAGTTATAATAAGCTAAACGGAAGCATACCTTGGGAAATTGGTGGAGCTGTTTCTTTGAAAGAACTGATTTTGGAAAACAACTTCCTTATTGGGAAAATTCCTATCTCAATCCAGAACTGCTCTTCATTAACAACTTTGATTCTGTCGAAGAACAAGCTGAGTGGGTCGATACCTGCAGCAGTTGCAAGTCTCACCAACCTGAAAACTGTTGACTTGTCATTCAACACCCTTACTGGAAACCTTCCCAAGCAATTGGCCAACCTTCCCAATCTCCTAACCTTCAATTTATCTCACAACAACCTTAAGGGTGAACTACCGGCTGGTGGTTTCTTCAACACCATTTCGCCTTCCTCCGTTTCTGGCAATCCATTTATTTGTGGCTCTGTTGTGAACAGAAAATGCCCTGTTAAACTCCCAAAGCCTATTGTTCTGAATCCCACCAACTTTTCTCCTGACTCTGACCCGGGTTCACCTATCCCGACATTGGGTCATAAGAGAAATATCCTCAGCATTTCGGCACTCATTGCCATTGGTGCAGCTGCTTTCATTGTAATTGGTGTCATTGGCATAACTGTTCTCAACCTCCGTGTTCGGTCCACCACATCTCGATCTCCAGCTGCTCTTGCTTTTTCTGCAGGGGATGAATACAGCCGTTCGCCAACAACAGATGCAAACTCTGGCAAGCTTGTCATGTTTTCAGGTGAACCCGATTTCAGCTCTGGAGCACATGCTTTGCTTAACAAGGATTGCGAGCTTGGGCGTGGAGGATTTGGCGCTGTGTACCAAACAGTTCTTGGAGATGGGCGTTCAGTTGCTATAAAGAAGCTCACTGTGTCAAGCCTTGTAAAGTCCCAAGATGATTTCGAGAGGGAAGTGAAGAAATTAGGCAAAGTCAGACACCAAAATCTCGTCGAACTCGAAGGCTATTATTGGACTTCATCACTACAACTTCTTATATACGAGTTTGTCTCCCGTGGTAGCCTTTACAAGCATCTCCACGAAGGATCAGGCGAAAGCTTCCTTTCTTGGAACGAAAGGTTTAACGTCATCCTCGGTACAGCGAAGGCCTTATCTCACTTGCACCACTCCAACATTATTCACTACAACATTAAGTCAACCAACATCCTAATTGATAGCTACAGCGAACCTAAAGTAGGGGATTACGGCCTAGCAAGGCTGCTACCAATGCTTGATCGCTACGTCTTAAGCAGCAAAATTCAGAGCGCACTCGGCTACATGGCACCGGAGTTTGCCTGCAAAACTGTAAAAATCACCGAGAAATGCGATGTTTATGGGTTCGGAGTCTTGGTTTTGGAGACAGTGACAGGGAAGAGGCCAGTAGAGTATATGGAAGATGATGTGGTTGTGCTTTGTGACATGGTTAGAGGAGCATTGGATGAAGGGAGGGTAGAGGAATGTATTGATGAGAGGCTACAAGGGAAGTTCCCAGTAGAGGAAGTGATTCCTGTTATTAAGCTTGGTTTGGTATGTACTTCACAAGTACCATCTAATAGGCCAGAAATGGGAGAGGTAGTTACCATATTGGAGCTTATAAAATGCCCCTCAGGCTCAGAAGGACAAGAAGAGTTGTCAGGATGA 2958 0.4263 MEASSKMSVVRVFLLCLFLLFLVTLTAVTAVNPSLNDDVLGLIVFKADIQDPKGKLTSWNEDDESACSGSWVGVKCNPRSNRVVEVNLNGFSLSGRIGRGLQRLQFLRRLYLANNNLTGSINANIATIDNLRVLDLSNNNLSGVVSDDFFRQCGSMRVVSLARNRFSGNVPSSLGSCAAIATIDLSFNQFSGNVPKEIWSLSGLRSLDLSDNLLEGEVPKGVEAMKNLRSINLARNSFSGKIPDGFGSCLLLRSIDFGDNSFSGSVPSDLKELVLCGYFSLRGNAFSGDVPDWIGEMKGLQTLDLSLNRFSGLVPNTLGNLWSLKTLNLSGNGFTGNLPESMVNCTNLLALDVSQNSLSGNLPSWIFRSDLEKVMVVKSRMVGRVESPLYSLTEASVQSLQVLDLSHNAFSGEITSAVSGLSSLQVLNLSFNLLGGHIPAAIGDLKTCSSLDLSYNKLNGSIPWEIGGAVSLKELILENNFLIGKIPISIQNCSSLTTLILSKNKLSGSIPAAVASLTNLKTVDLSFNTLTGNLPKQLANLPNLLTFNLSHNNLKGELPAGGFFNTISPSSVSGNPFICGSVVNRKCPVKLPKPIVLNPTNFSPDSDPGSPIPTLGHKRNILSISALIAIGAAAFIVIGVIGITVLNLRVRSTTSRSPAALAFSAGDEYSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLGDGRSVAIKKLTVSSLVKSQDDFEREVKKLGKVRHQNLVELEGYYWTSSLQLLIYEFVSRGSLYKHLHEGSGESFLSWNERFNVILGTAKALSHLHHSNIIHYNIKSTNILIDSYSEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLETVTGKRPVEYMEDDVVVLCDMVRGALDEGRVEECIDERLQGKFPVEEVIPVIKLGLVCTSQVPSNRPEMGEVVTILELIKCPSGSEGQEELSG* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1624 985 Pfam Leucine Rich Repeat 130 149 IPR001611 GO:0005515
Mal2g1624 985 Pfam Leucine Rich Repeat 227 249 IPR001611 GO:0005515
Mal2g1624 985 Pfam Leucine Rich Repeat 471 493 IPR001611 GO:0005515
Mal2g1624 985 CDD STKc_IRAK 705 971 - -
Mal2g1624 985 ProSiteProfiles Leucine-rich repeat profile. 130 151 IPR001611 GO:0005515
Mal2g1624 985 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 973 - -
Mal2g1624 985 Pfam Leucine rich repeat N-terminal domain 36 77 IPR013210 -
Mal2g1624 985 SUPERFAMILY L domain-like 266 593 - -
Mal2g1624 985 Pfam Leucine rich repeat 280 333 IPR001611 GO:0005515
Mal2g1624 985 Pfam Leucine rich repeat 399 458 IPR001611 GO:0005515
Mal2g1624 985 Pfam Leucine rich repeat 495 554 IPR001611 GO:0005515
Mal2g1624 985 Pfam Protein tyrosine and serine/threonine kinase 701 966 IPR001245 GO:0004672|GO:0006468
Mal2g1624 985 ProSitePatterns Protein kinases ATP-binding region signature. 705 728 IPR017441 GO:0005524
Mal2g1624 985 SMART LRR_typ_2 321 345 IPR003591 -
Mal2g1624 985 SMART LRR_typ_2 225 249 IPR003591 -
Mal2g1624 985 SMART LRR_typ_2 201 224 IPR003591 -
Mal2g1624 985 SMART LRR_typ_2 541 565 IPR003591 -
Mal2g1624 985 SMART LRR_typ_2 297 320 IPR003591 -
Mal2g1624 985 SMART LRR_typ_2 421 445 IPR003591 -
Mal2g1624 985 SMART LRR_typ_2 397 420 IPR003591 -
Mal2g1624 985 SMART LRR_typ_2 517 540 IPR003591 -
Mal2g1624 985 SMART LRR_typ_2 128 151 IPR003591 -
Mal2g1624 985 Gene3D Ribonuclease Inhibitor 300 590 IPR032675 -
Mal2g1624 985 Gene3D Transferase(Phosphotransferase) domain 1 776 981 - -
Mal2g1624 985 SUPERFAMILY RNI-like 86 368 - -
Mal2g1624 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 14 973 - -
Mal2g1624 985 PRINTS Leucine-rich repeat signature 421 434 - -
Mal2g1624 985 PRINTS Leucine-rich repeat signature 131 144 - -
Mal2g1624 985 Gene3D Ribonuclease Inhibitor 36 195 IPR032675 -
Mal2g1624 985 Gene3D Ribonuclease Inhibitor 196 292 IPR032675 -
Mal2g1624 985 Gene3D Phosphorylase Kinase; domain 1 693 775 - -
Mal2g1624 985 ProSiteProfiles Protein kinase domain profile. 699 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1624 985 SUPERFAMILY Protein kinase-like (PK-like) 702 972 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1624 Mal-Chr2 19589623 19593343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1624 17 980 Receptor kinase-like Gene Family AT3G56370 66.460 0.0 1243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mal2g1624 PK_Tyr_Ser-Thr 3.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1624 - - mtr:MTR_3g093930 1773.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1624 2 19589623 19593343 Mal2g1624 2 19589623 19593343 ECH