Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1623 ATGTCCTCCGATGACATCAATCTCACTCCCGATCAAAGAATCGAAAACGGCCTCACTTCCCCTCTCGTATTTCAAGACGACCCTCTCCGCTTCAACTGCGGCGGCGCACAACCGCGACAGGTCGGCGATCCGGTTCCTAAAACCGGCGGTTTCATCGACGATAAGATGTTCACCGTCAATCGCGATCGTTTTTTCACTTCTCAGGGCACGGAGTTCCGTCGGAATGTTTTCTCCGATCGTGGGAACCCGTCAGATGTACTGAACTGGAGTGAGGGAACTCCAAGTAGCAATGACTCGGATGGCGAAGACGATGAAGATGATGATGAAGACGACGATGGAGACACCACAGTAGATAGACTCGTCGGTATTGGTGATGGTAGCAAGCGCAATTCCAACTCAATCATTGATGTTAACAATAGCAATAGCAGTGGTGTTGCAAATGGGAAATCCCAGCATCATTCCCCTTATGTTTCTGGTAGAGAGATATTGGGAAAGGACGGTGTTGTTGTACAATTGGCACATAACAATGTGAGTAGTACTACTGGTGAAGATCGTCAGCGAGAAAGGTTAGGTAAAAGTCAGAACTCAGTAACTGTTGGTGAAACTGACTGTGAGGAGTACTATTCGCATTATCTTCAAGGTACAGAAGGTTCACCTTCTGTGCAGAAAGTTATGGGGGATGACAATGGTTGTGGGTTTAGTGGAAGAAAGGAAGCTGTGTATTCAAGCGAGTCAGGGGAGTCATTGAGGGCAATTCTTTCAGATCCTGTTACTGGAACTCTTATGGATGATGCAATGATATTACCTTGTGGACATTCATTTGGTGGAGGTGGAATACAGCATGTTATTAGAATGAAAGCTTGTTGTACTTGTTCTCAACCCACATTGGAGGAATCAATATCTCCAAATCTTTCACTTCGAGCTGCTGTACAGGCGTACCGTCGGGAAGAGGAATCACAATTTTACCGGTCATCCAAAAGAAAAAGAGAACGATTTGATCAGGGTGGTTTCGGAGAGTGTTCTGTTATTGAACCATCAAGGAGTAGAGGTGTTCAATTTCCATTTGCTGTGACAGACCGGGTTATTATAAAGGGGAACAAAAGGACACCGCAACGCTTTGTTGGGCGTGAAGCTATTGTAACAACACAATGCCTGAATGGATGGTATGTGGTGAAGACATTGGACAATGCAGAGAGTGTAAAATTGCAGTATCGCTCCCTTGCCAAGGTTTCTGACGATCCTTCAAAACCTGTCTCCAGCAACATGGGACCTAATTGGCTTCAAATCTGCCGCACAACATAA 1302 0.4562 MSSDDINLTPDQRIENGLTSPLVFQDDPLRFNCGGAQPRQVGDPVPKTGGFIDDKMFTVNRDRFFTSQGTEFRRNVFSDRGNPSDVLNWSEGTPSSNDSDGEDDEDDDEDDDGDTTVDRLVGIGDGSKRNSNSIIDVNNSNSSGVANGKSQHHSPYVSGREILGKDGVVVQLAHNNVSSTTGEDRQRERLGKSQNSVTVGETDCEEYYSHYLQGTEGSPSVQKVMGDDNGCGFSGRKEAVYSSESGESLRAILSDPVTGTLMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQPTLEESISPNLSLRAAVQAYRREEESQFYRSSKRKRERFDQGGFGECSVIEPSRSRGVQFPFAVTDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVSDDPSKPVSSNMGPNWLQICRTT* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1623 433 MobiDBLite consensus disorder prediction 75 157 - -
Mal2g1623 433 SUPERFAMILY RING/U-box 247 319 - -
Mal2g1623 433 MobiDBLite consensus disorder prediction 75 96 - -
Mal2g1623 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 248 318 IPR013083 -
Mal2g1623 433 ProSiteProfiles U-box domain profile. 248 320 IPR003613 GO:0004842|GO:0016567
Mal2g1623 433 MobiDBLite consensus disorder prediction 177 197 - -
Mal2g1623 433 MobiDBLite consensus disorder prediction 1 19 - -
Mal2g1623 433 MobiDBLite consensus disorder prediction 126 154 - -
Mal2g1623 433 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62 47 427 - -
Mal2g1623 433 MobiDBLite consensus disorder prediction 97 115 - -
Mal2g1623 433 MobiDBLite consensus disorder prediction 1 21 - -
Mal2g1623 433 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 47 427 - -
Mal2g1623 433 Pfam U-box domain 254 318 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1623 Mal-Chr2 19572030 19576982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1623 193 427 Plant U-box Gene Family AT5G05230 61.983 1.47e-89 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1623 - - adu:107470194 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1623 2 19572030 19576982 Mal2g1623 2 19572030 19576982 ECH