Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1617 ATGGCAATTGTAGCAACCTCATTCATCTCTATTCTTTTCTTTGTTCTTAGCTTATGCCTTAAAGGCACTTATGGTGACTATGGAGGTGGATGGCAAAATGCTCATGCCACATTTTATGGTGGAGGAGATGCATCAGGCACAATGGGAGGGGCTTGTGGTTATGGAAATTTGTACAGCCAAGGTTATGGAACCAACACTGCTGCACTCAGCACTGCTCTTTTCAACAATGGCTTGAGCTGTGGGTCTTGCTATGAGATGAAATGTGACAGTGACCCAAAATGGTGCCTTCCCGGTAGCATATTGGTCACTGCCACTAACTTTTGCCCACCAAACTTTGCAGAGTCTAATACCAATGGTGGATGGTGCAACCCTCCCCTTCAGCACTTTGATCTTGCTGAGCCTGCTTTCTTACAAATTGCTCAATACAAAGCTGGAATTGTTCCTATTTCCTTCAGAAGAGTCCCCTGTGTTAAGAAAGGAGGAATCAGATTCACAATCAATGGACACTCATACTTCAACTTGGTTTTGGTCACAAATGTTGGTGGAGCTGGAGATGTACATTCAGTGTCCATCAAGGGATCAAAGACTGGATGGCAAGCTATGTCAAGGAACTGGGGGCAGAATTGGCAAAGCAATAACTACCTCAATGGTCAAAGCCTTTCTTTCCAATTCAATATGCTGGGCAATAGGACTGGCATTCAATTCCCTGAATTTACAACAGAAATTAAGGCATCAACAGTAACCATGTGTTAA 753 0.4356 MAIVATSFISILFFVLSLCLKGTYGDYGGGWQNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCDSDPKWCLPGSILVTATNFCPPNFAESNTNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRVPCVKKGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQFNMLGNRTGIQFPEFTTEIKASTVTMC* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1617 250 SUPERFAMILY PHL pollen allergen 158 231 IPR036749 -
Mal2g1617 250 SUPERFAMILY Barwin-like endoglucanases 11 179 IPR036908 -
Mal2g1617 250 Gene3D - 160 241 IPR036749 -
Mal2g1617 250 Gene3D - 21 156 IPR036908 -
Mal2g1617 250 SMART dpbb_1 66 151 IPR007112 -
Mal2g1617 250 PRINTS Expansin signature 160 172 IPR002963 GO:0009664
Mal2g1617 250 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Mal2g1617 250 PRINTS Expansin signature 119 136 IPR002963 GO:0009664
Mal2g1617 250 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Mal2g1617 250 PRINTS Expansin signature 136 149 IPR002963 GO:0009664
Mal2g1617 250 PRINTS Expansin signature 172 193 IPR002963 GO:0009664
Mal2g1617 250 PRINTS Expansin signature 100 110 IPR002963 GO:0009664
Mal2g1617 250 PRINTS Expansin signature 207 228 IPR002963 GO:0009664
Mal2g1617 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 232 IPR007117 -
Mal2g1617 250 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Mal2g1617 250 PRINTS Expansin/Lol pI family signature 198 212 IPR007118 GO:0005576
Mal2g1617 250 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Mal2g1617 250 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Mal2g1617 250 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Mal2g1617 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 161 IPR007112 -
Mal2g1617 250 Pfam Lytic transglycolase 66 150 IPR009009 -
Mal2g1617 250 PANTHER EXPANSIN-A15 6 231 IPR002963 GO:0009664
Mal2g1617 250 Pfam Expansin C-terminal domain 162 229 IPR007117 -
Mal2g1617 250 PANTHER EXPANSIN 6 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1617 Mal-Chr2 19498473 19501286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1617 10 231 Expansin Gene Family AT2G40610 79.821 1.91e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1617 K20628 - mnt:21394504 438.728