Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1602 ATGGAAAGTGTTAGTAACATTGGTTTCTCTTCAACATTCAGAGCTTCTTTGAACACAAAGCTACTTTCAAAGCATAGGAAACAAAAATCGCCATGCAGTTTTATGGTTCCTATCAACTACTCTATTAGGATGAACAAAATTTGTTGTACACTATCAGAAAGTGGGATTGAAGAGAATCCTATCAGCAAAAGGGTGTCTAAATCTAAGGACATGATGGAAGAATACAATATAGCTATGAAGAAGATGATGAGGAACCCTTATGAGTACCATCACGATCTGGGTATGAACTATACAGTTATAACTGACAATTTGATTGTGGGGTCCCAACCACAGAAACCTGAAGATGTAGATCACCTTAAGAAGGAAGAAGGTGTAGCGTACATTCTAAACTTGCAACAGGATAAGGATGCCGAGTTTTGGGGAATAGACTTGCAGTCAATAGTAAAGAAGTGTCGCGAACTTGAAATTAGACACATGAGGAGACCGGCAGTAGACTTTGATCCAAACTCTTTGCGAAGTGCACTACCTAAAGCAGTGTCATCCTTAGAATGGGCAATTTCTGAGGCAAAAGGAAGAGTTTATGTGCATTGTACTGCAGGACTTGGAAGAGCTCCAGCAGTGGCAATAGCTTATTTGTTCTGGTTTTGTGACATGAATCTAAATGAAGCCTATGATATGCTAACTTTAAAGAGACCTTGTGGACCGAATAAAAAAGCCATACAAGGAGCTACCTATGATTTGGCTAAGAATGATCCATGGAAGGAGCCATTTGAGAGTCTTCCAGACCATGCTTTCGGGGATATAGCAGACTGGGAGAGGAACCTGATTCAGAACCGTGTCCGCGCTCTTCGTGGAACCTGA 861 0.41 MESVSNIGFSSTFRASLNTKLLSKHRKQKSPCSFMVPINYSIRMNKICCTLSESGIEENPISKRVSKSKDMMEEYNIAMKKMMRNPYEYHHDLGMNYTVITDNLIVGSQPQKPEDVDHLKKEEGVAYILNLQQDKDAEFWGIDLQSIVKKCRELEIRHMRRPAVDFDPNSLRSALPKAVSSLEWAISEAKGRVYVHCTAGLGRAPAVAIAYLFWFCDMNLNEAYDMLTLKRPCGPNKKAIQGATYDLAKNDPWKEPFESLPDHAFGDIADWERNLIQNRVRALRGT* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1602 286 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 238 IPR029021 -
Mal2g1602 286 Pfam Dual specificity phosphatase, catalytic domain 117 236 IPR000340 GO:0008138|GO:0016311
Mal2g1602 286 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 1 286 - -
Mal2g1602 286 SMART dsp_5 96 238 IPR020422 GO:0006470|GO:0008138
Mal2g1602 286 ProSiteProfiles Dual specificity protein phosphatase domain profile. 96 253 IPR020422 GO:0006470|GO:0008138
Mal2g1602 286 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 232 IPR000387 GO:0016311|GO:0016791
Mal2g1602 286 Gene3D Protein tyrosine phosphatase superfamily 79 286 IPR029021 -
Mal2g1602 286 CDD DSP_laforin-like 95 242 IPR045204 GO:0019203|GO:0046838
Mal2g1602 286 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1602 Mal-Chr2 19384068 19386852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1602 58 286 Protein tyrosine phosphatase (PTP) family AT3G10940 79.130 1.70e-140 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1602 - - gmx:100805592 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1602 2 19384068 19386852 Mal2g1602 2 19384068 19386852 ECH