Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1595 ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATAAAAAGGGAAGGAGATCATCATCATGTTTCAAATTCAAATCAAATGGGAAGAAGACATATGTTAGGTCCACCAGGAACCCTAAATACTATAACCCCTTGTGCAGCATGTAAGCTTTTAAGAAGAAGATGTGCTCAAGAATGTCCCTTTTCTCCCTATTTCTCTCCTCATGAACCACAGAAGTTTGCTTCTGTTCACAAAGTTTTTGGTGCTAGCAATGTCTCCAAGATGCTAATGGAGGTAGCAGAGTGTTCTAGAGCAGATGCAGCAAATAGTCTTGTTTATGAAGCAAATGTGAGACTAAGAGATCCAGTTTATGGATGCATGGGTGCAATTTCTGCATTACAACAACAGGTTCAATCTTTACAAGCTGAACTCAATGTATTAAGAGGTGAAATACTTAAATACAAATTAAGGGAAGCAGCTAACATCAACATGAATAATATGAATATCAATATGAATATGAATATGATCACACCCTCTTCTCATCATCTTGCAATGCTTCCTAATTCCTCTGTGGCTGTTTCAATTGCTGCTCCACCGCCGCCGCCGCCACCACCACCTCCTCTTCCTCCTACAACTTCTAATTCCTCTTCTTCCATATACTTTCAACAGAGGGATCCCAACTATAGCACAATTTCAAGTGATGATAATATTTCCTATTTTGGTTAA 714 0.3908 MSRERERFDEIGKKIKREGDHHHVSNSNQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVAECSRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNVLRGEILKYKLREAANINMNNMNINMNMNMITPSSHHLAMLPNSSVAVSIAAPPPPPPPPPPLPPTTSNSSSSIYFQQRDPNYSTISSDDNISYFG* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1595 237 MobiDBLite consensus disorder prediction 190 208 - -
Mal2g1595 237 ProSiteProfiles LOB domain profile. 46 147 IPR004883 -
Mal2g1595 237 MobiDBLite consensus disorder prediction 209 237 - -
Mal2g1595 237 MobiDBLite consensus disorder prediction 190 237 - -
Mal2g1595 237 MobiDBLite consensus disorder prediction 1 27 - -
Mal2g1595 237 Coils Coil 126 153 - -
Mal2g1595 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 237 - -
Mal2g1595 237 Pfam Lateral organ boundaries (LOB) domain 47 143 IPR004883 -
Mal2g1595 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 32 237 - -
Mal2g1595 237 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1595 Mal-Chr2 19213946 19214972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1595 5 180 AS2 family AT2G30340 62.842 4.45e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal2g1595 LOB 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1595 - - gmx:100790799 310.842