Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1579 ATGGAATTGGCCGCAAAACTTCACCACCTCGACCTCGCCGGAGCATTTATTCTCGATTCACGACGCCTTCCACGTACCTTATCTCACACTCATCTCACCGCCAAACCCAACACTATCAACACCAACACTAACTCCAATCGATTCTTTCCCTCAAAAAAACTCAATCACACTTCACGTTTATCCGCCGTCGCTGCCGTCGATGAAACTTCAGCAGCCGAAGACGATATCGAGTCATTATTTTCCGATACTTCAGTCGATGAACGACGGGGTAACAATAAACAATCTAACACCGGCGCTTCAAGCGTTTCGTCCGGTGTGAAATTAGAAAATATTATAAAAACTTACAAAGGTGTTACGATTTTGAAAGAGGTTAATTGGGAAGTGAAAAAGGGAGAGAAAGTTGGGTTAGTTGGTGTAAATGGTGCGGGGAAGACGACGCAGATGAGAATTATTGCGGGTTTGGAAGAACCGGATTCGGGGAATGTGACAAAAGCGAAACCGAATATGAAAATTGCATTTTTGAGTCAAGAATTTGAGGTTTCGCAGAGTAGGACGGTGAGGGAGGAGTTTATGAGTGCTTTTAAAGAGGAAAAGGAGGTTGCGGGGAAATTGGAGAAAGTGCAGAAGGCGCTTGAGGATTCTGTTAATGATTTGGAGTTGATGGGGAGGCTTTTGGATGAGTTTGATTTGCTTCAGAGACGAGCTCAGTCTGTGAATTTGGATGTTGTTGATTCGAAGATAAGTAAGTTGATGCCTGAACTTGGTTTTGGTGTAGAGGATTCTGATAGGTTGGTTGCTTCTTTTAGTGGTGGATGGCAGATGAGGATGTGTCTCGGCAAGATTCTACTTCAGGAACCAGATTTGTTGTTGTTAGATGAGCCCACAAATCACCTTGATCTTGACACCATTGAGTGGCTTGAAGACTATCTTAACAAGCAGGATGTGCCTATGGTTATCATTTCCCACGATAGAGCTTTTCTCGATCAACTATGTACAAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGAAATTATTCTCAGTATATACTTTCAAAGGCAACTTGGATTGAAACACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAACAGACAAGAGAGTTGATAAGTAGGTTAGGTGCCGGAGCAAGTTCTGGCCGTGCTTCGTCTGCTGAGAAGAAATTGGAAAAACTTCTGGGAGAGGAACTAGTAGAGAAGCCATTTGAACGGAAACAAATGAAAATCAGGTTCCCTGTGCGTGGAAGCAGTGGAAGATCTGTTGTAACAGTTAGGAACTTGGATTTTGGCTTTGAGGATAAAACACTTTTCAACAAGGCAAATCTGACAATTGAAAGGGGGGAAAAAATTGCCATTCTTGGTCCAAATGGATGCGGCAAGAGTACTTTACTAAAATTGATTATGGGTTTAGAGAAGCCAATCAGTGGTGAAGTTATACTCGGGGAGCATAATGTATTGCCTAACTATTTTGAGCAAAATCAGGCTGAGGCGCTTGATCTGGAAAAGACAGTGCTTCAGACAGTAGAGGAAGCTGCAGAGGACTGGAGGAGTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGATCGTAAAGTTTCTCTATTGAGTGGCGGTGAGAAGGCACGGCTGGCATTTTGCAAATTCATGGTAAAACCATCAACTCTGCTTGTTTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAACGAGTACGAGGGCACTGTTATCACAGTATCTCATGATCGGTACTTTATAAAGCAGATAGTTAATAGAGTGATTGAAGTTAAAGATGGCACTGTACAGGATTATGCTGGAGATTACAATTATTATTTGGAGAAGAATCTTGATGCTAGAGAAAGAGAGCTTGAACGCCAGGCAGAGCTTGACGAAAAAGCTCCTAAATTGAAAGCCAAATCCAAGATGTCCAAGGCTGAGAAAGAAGCAAGGAAGAAGCAAAAGATGCAGGCCTTTCAGCAAGCAAAACAGAAGTCTAAAGGTTTAAAAAATTCAAAGAGATGGAATTGA 2103 0.4199 MELAAKLHHLDLAGAFILDSRRLPRTLSHTHLTAKPNTINTNTNSNRFFPSKKLNHTSRLSAVAAVDETSAAEDDIESLFSDTSVDERRGNNKQSNTGASSVSSGVKLENIIKTYKGVTILKEVNWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDSGNVTKAKPNMKIAFLSQEFEVSQSRTVREEFMSAFKEEKEVAGKLEKVQKALEDSVNDLELMGRLLDEFDLLQRRAQSVNLDVVDSKISKLMPELGFGVEDSDRLVASFSGGWQMRMCLGKILLQEPDLLLLDEPTNHLDLDTIEWLEDYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYILSKATWIETQYAAWEKQQKEIEQTRELISRLGAGASSGRASSAEKKLEKLLGEELVEKPFERKQMKIRFPVRGSSGRSVVTVRNLDFGFEDKTLFNKANLTIERGEKIAILGPNGCGKSTLLKLIMGLEKPISGEVILGEHNVLPNYFEQNQAEALDLEKTVLQTVEEAAEDWRSDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYEGTVITVSHDRYFIKQIVNRVIEVKDGTVQDYAGDYNYYLEKNLDARERELERQAELDEKAPKLKAKSKMSKAEKEARKKQKMQAFQQAKQKSKGLKNSKRWN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1579 700 ProSitePatterns ABC transporters family signature. 552 566 IPR017871 GO:0005524
Mal2g1579 700 Pfam ABC transporter 121 296 IPR003439 GO:0005524
Mal2g1579 700 Gene3D - 103 387 IPR027417 -
Mal2g1579 700 PANTHER ABC TRANSPORTER F FAMILY MEMBER 5 49 690 - -
Mal2g1579 700 MobiDBLite consensus disorder prediction 652 680 - -
Mal2g1579 700 Pfam ABC transporter 335 422 IPR032781 -
Mal2g1579 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 639 IPR027417 -
Mal2g1579 700 CDD ABCF_EF-3 433 625 - -
Mal2g1579 700 MobiDBLite consensus disorder prediction 652 700 - -
Mal2g1579 700 Gene3D - 396 662 IPR027417 -
Mal2g1579 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 106 364 IPR003439 GO:0005524
Mal2g1579 700 Pfam ABC transporter 449 580 IPR003439 GO:0005524
Mal2g1579 700 MobiDBLite consensus disorder prediction 80 102 - -
Mal2g1579 700 Coils Coil 660 689 - -
Mal2g1579 700 CDD ABCF_EF-3 106 336 - -
Mal2g1579 700 ProSitePatterns ABC transporters family signature. 268 282 IPR017871 GO:0005524
Mal2g1579 700 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 49 690 - -
Mal2g1579 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 433 648 IPR003439 GO:0005524
Mal2g1579 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 341 IPR027417 -
Mal2g1579 700 SMART AAA_5 130 345 IPR003593 -
Mal2g1579 700 SMART AAA_5 457 625 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1579 Mal-Chr2 19041882 19047236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1579 430 650 Calmodulin-binding Proteins AT2G36910 25.101 8.28e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1579 - - gmx:100796907 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1579 2 19041882 19047236 Mal2g1579 2 19041882 19047236 ECH