Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1573 ATGAAACCCACCTTGTATAGCACCAACACTCTCTTACTCCTCCTTGCTCTATTCCTCCTCCACTTAGCACCATACCTTTGTGCAACTTCTGAAACAGACCCAACTTCACAACTTCTCAACTTCAAAAAAACTCTCCCAAACCCATCTCTTCTCCATAACTGGCTCCCAAACAAAAACCCATGTTCATTCACTGGTATCACCTGCAACCAAACCACCATAACTTCCATAGACCTCACCTCAATCCCCCTCAACACCAACCTCACCATAATCACAACCTACCTCCTCACCCTCCCTCATCTCCAAATCCTCACCCTCAAATCTTCAAACGTTACATCATCACCACCCATTCCTCTCTCCCACACCAAGTGCACCTCCACCCTCACCACCATAGATCTATCACAAAACACACTCTCTTTATCTTTCTCAGACCTCTCTTTTCTCTCTACATGCTTATCCCTTAAATCACTTAACCTCTCCAACAACGCCCTCGAATTCGATTCTCCTAAATGGAGTTTCCCTTCATCTCTTAAATCTCTCAACCTTTCCAACAACAAAATCTCTGGCCCCACTTTCTTCCCCTGGATCCTCAACCATGACTTAGAGCTTTTATCTCTCGGAGGAAACAAAATCACCGGCGAAATAGATTTCTCCGGTTACACCACTCTCCGTTACTTAGACCTTTCTTCAAACAATTTCACTGTTTCAGTTCCATCTTTCGGTGAATGTTTATCTCTTCAATACCTCGATATCTCAGCAAACAAGTACTTCGGTGACATTACAAGAACACTATCACCTTGTAAGAATCTCATTCACCTTAACATCTCCGGTAACCAGTTCACCGGTCTGGTTCCCGAATTTCCATCCGGTTCACTACAGTTTCTTTATCTTGCTAAAAACCACTTCGCCGGAAAAATACCGGCGCGTCTTGCTGAGCTTTGTTCGACTCTTGTGGAGCTTGATCTTTCTTCTAATAATCTTACCGGTGAAATCCCACGCGAGTTCGGCGCGTGTACTTCGTTGAAGTCGTTTGATATTTCGACCAATAAGTTCGCCGGTGAACTTCCGATGGAGGTTTTAACGGAGATGAAGAGTTTGAAAGAGCTTGCGGTGGCGTTTAACGAATTTGTGGGTCCACTTCCGGTGTCGTTGTCGAAGATGACGAGTTTGGAATCGTTAGATCTGAGTTCGAATAACTTCACCGGAACGATTCCGAAGTGGCTTTGTGAAGAAGAGTTAGGAAATAATTTGAAGGGACTTTACTTGCAAAATAACGGTTTAACGGGTTTTATTCCACCAACGCTAAGTAACTGTTCGAACCTCGTTGCTCTTGATTTGAGTTTCAATTATCTCACGGGAACTATTCCTCCAAGTTTAGGTTCCCTTTCGAAGCTTCGTGATTTAATCATGTGGTTGAATCTGCTTCATGGGGAAATTCCTCAAGAGCTTGGAAATATGGAGAGTTTGGAGAATTTGATTCTTGATTTTAATGAGTTGAGTGGAGGTATTCCATCTGGGTTAGTGAATTGCAGTAACTTGAATTGGATCTCGCTGTCGAATAACAGGCTTAGTGGAGAGATTCCGGCGTGGATTGGGAAGCTTTCGAATCTTGCTATTTTGAAGCTGAGTAATAATTCTTTCTCCGGGAGGATTCCGCCGGAGTTAGGAGATTGCCCTAACTTGTTATGGTTGGATCTGAATACAAATTCACTTACAGGAACAATACCGCCGGAGTTGTTCAAGCAATCGGGGAAAATCACGGTTAATTTCATTAGTGGGAAGACATATGTTTACATTAAGAATGATGGTAGTAAAGAGTGTCATGGAGCTGGGAACTTGCTGGAGTTTGCAGGGATTAGTCAGCCACAATTGAACAGAATTTCGACCAAGAACCCTTGCAATTTCACTAGGGTTTATAGAGGTAACCTTCAACCAACGTTTACCGTTAATGGTTCAATGATCTTTTTGGATATTTCATACAACATGTTGTCTGGTACTATTCCTAAGGAAATTGGTGAAATGTACTATCTCTACATTTTGCATTTAAGCCATAATCTCTTGTCTGGTAGCATTCCTCAAGAGATGGGTAGGATGAAGAATCTCAACATTCTTGATCTTTCACACAATAAGCTGCAAGGTCAAATTCCATCATCCTTGGCAGGGGTTTCATTGCTCACTGAGATTGACCTGTCCAACAATTATCTCTCTGGATTGATTCCGGAATACGGTCAATTCGATACGTTTCCAGCTGTTAAGTTTCAGAACAACTCTGGTCTATGCGGGGTTCCTCTTCCTCCGTGTGCGACAGACGCCGGTGCTGGTGCGATGCAGCATCAGAAGTCTCATAGGAGACAGGCATCACTTGCAGGTAGTGTGGCAATGGGATTGCTTTTCTCTCTTTTCTGTGTTTTCGGTTTGATCATTATTGCTATTGAGACAAGAAAGAGGAGGAAGAAAAAGGAGGCTGCTATTGATGGCTACATTGACAATTCTCATTCTGGTAATGCCAATAATACTAGCTGGAAACTGACCAGTGCCCGCGAAGCTCTCAGCATAAACCTTGCAACGTTTGAAAAGCCCCTACGAAAGCTCACTTTTGCGGATCTTCTAGATGCAACCAATGGCTTTCACAACGACAGTCTCATTGGTTCTGGTGGTTTTGGTGACGTTTATAAAGCTCAATTGAAAGATGGAAGTGTCGTGGCCATCAAGAAACTGATACATGTAAGTGGACAAGGGGACAGGGAATTCACAGCTGAGATGGAAACCATTGGGAAAATCAAGCACAGAAACCTTGTTCCTCTTTTGGGATACTGCAAGGTTGGAGAGGAAAGACTGTTGGTTTACGAGTACATGAAATATGGAAGTCTAGAAGACGTACTGCACGATCCAAAGAAAGCTGGGATCAAGATGAATTGGTCAGTGAGGAGGAAGATTGCAATTGGAGCTGCAAGGGGGTTGGCTTTTCTTCACCATAGTTGTATCCCCCACATCATTCACAGAGACATGAAATCAAGCAATGTGTTGCTTGATGAAAATTTGGAAGCAAGGGTCTCTGATTTTGGAATGGCTAGGCTCATGAGTGCTATGGATACCCATTTAAGTGTAAGCACGTTGGCGGGCACACCGGGTTATGTTCCTCCAGAATACTATCAGAGCTTTAGATGCTCCACTAAAGGTGATGTTTATAGTTATGGTGTAGTTTTGCTGGAGTTGCTGACGGGGAAAAGACCGACGGATTCAGCTGATTTTGGTGATAACAATCTTGTTGGATGGGTTAAACAACATGCCAAACTTAAAATAAGTGATGTTTTTGATCCAGAGCTTATGAAAGAAGACCCCAATATGGAGATTGAGCTTTTACAGCATTTAAAGGTAGCTTGTGCTTGTTTGGATGATAGACCTTGGAGGAGACCTACAATGATTCAAGTCATGACAATGTTCAAGGAAATACAAGCAGGTTCTGGAATGGATTCTCAATCTACTATAGCCACTGAAGATGAAGGTTTCAATGCCGTTGAAATGGTTGAAATGAGCATTAAAGAAGTTCCTGAACTAAACAAGCATTAG 3567 0.4278 MKPTLYSTNTLLLLLALFLLHLAPYLCATSETDPTSQLLNFKKTLPNPSLLHNWLPNKNPCSFTGITCNQTTITSIDLTSIPLNTNLTIITTYLLTLPHLQILTLKSSNVTSSPPIPLSHTKCTSTLTTIDLSQNTLSLSFSDLSFLSTCLSLKSLNLSNNALEFDSPKWSFPSSLKSLNLSNNKISGPTFFPWILNHDLELLSLGGNKITGEIDFSGYTTLRYLDLSSNNFTVSVPSFGECLSLQYLDISANKYFGDITRTLSPCKNLIHLNISGNQFTGLVPEFPSGSLQFLYLAKNHFAGKIPARLAELCSTLVELDLSSNNLTGEIPREFGACTSLKSFDISTNKFAGELPMEVLTEMKSLKELAVAFNEFVGPLPVSLSKMTSLESLDLSSNNFTGTIPKWLCEEELGNNLKGLYLQNNGLTGFIPPTLSNCSNLVALDLSFNYLTGTIPPSLGSLSKLRDLIMWLNLLHGEIPQELGNMESLENLILDFNELSGGIPSGLVNCSNLNWISLSNNRLSGEIPAWIGKLSNLAILKLSNNSFSGRIPPELGDCPNLLWLDLNTNSLTGTIPPELFKQSGKITVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISQPQLNRISTKNPCNFTRVYRGNLQPTFTVNGSMIFLDISYNMLSGTIPKEIGEMYYLYILHLSHNLLSGSIPQEMGRMKNLNILDLSHNKLQGQIPSSLAGVSLLTEIDLSNNYLSGLIPEYGQFDTFPAVKFQNNSGLCGVPLPPCATDAGAGAMQHQKSHRRQASLAGSVAMGLLFSLFCVFGLIIIAIETRKRRKKKEAAIDGYIDNSHSGNANNTSWKLTSAREALSINLATFEKPLRKLTFADLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKAGIKMNWSVRRKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNMEIELLQHLKVACACLDDRPWRRPTMIQVMTMFKEIQAGSGMDSQSTIATEDEGFNAVEMVEMSIKEVPELNKH* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1573 1188 SUPERFAMILY L domain-like 52 405 - -
Mal2g1573 1188 Gene3D Ribonuclease Inhibitor 38 766 IPR032675 -
Mal2g1573 1188 SUPERFAMILY Protein kinase-like (PK-like) 861 1153 IPR011009 -
Mal2g1573 1188 Pfam Protein kinase domain 875 1144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1573 1188 ProSitePatterns Protein kinases ATP-binding region signature. 881 904 IPR017441 GO:0005524
Mal2g1573 1188 ProSiteProfiles Protein kinase domain profile. 875 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1573 1188 Pfam Leucine rich repeat N-terminal domain 37 69 IPR013210 -
Mal2g1573 1188 Gene3D Transferase(Phosphotransferase) domain 1 951 1152 - -
Mal2g1573 1188 Pfam Leucine Rich Repeat 415 437 IPR001611 GO:0005515
Mal2g1573 1188 Pfam Leucine Rich Repeat 268 292 IPR001611 GO:0005515
Mal2g1573 1188 Gene3D - 588 648 - -
Mal2g1573 1188 PANTHER SYSTEMIN RECEPTOR SR160 15 1162 - -
Mal2g1573 1188 SUPERFAMILY L domain-like 290 755 - -
Mal2g1573 1188 Gene3D Phosphorylase Kinase; domain 1 835 950 - -
Mal2g1573 1188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 997 1009 IPR008271 GO:0004672|GO:0006468
Mal2g1573 1188 SMART LRR_typ_2 485 509 IPR003591 -
Mal2g1573 1188 SMART LRR_typ_2 386 410 IPR003591 -
Mal2g1573 1188 SMART LRR_typ_2 533 557 IPR003591 -
Mal2g1573 1188 SMART LRR_typ_2 266 289 IPR003591 -
Mal2g1573 1188 SMART LRR_typ_2 721 744 IPR003591 -
Mal2g1573 1188 SMART LRR_typ_2 697 720 IPR003591 -
Mal2g1573 1188 SMART LRR_typ_2 558 581 IPR003591 -
Mal2g1573 1188 Pfam Leucine Rich repeat 313 329 IPR001611 GO:0005515
Mal2g1573 1188 Pfam Leucine Rich repeat 174 188 IPR001611 GO:0005515
Mal2g1573 1188 Pfam Leucine Rich repeat 386 401 IPR001611 GO:0005515
Mal2g1573 1188 Pfam Leucine rich repeat 676 734 IPR001611 GO:0005515
Mal2g1573 1188 Pfam Leucine Rich repeats (2 copies) 220 260 IPR025875 -
Mal2g1573 1188 CDD STKc_IRAK 881 1150 - -
Mal2g1573 1188 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 1162 - -
Mal2g1573 1188 Pfam Brassinosteroid receptor island domain 583 647 IPR045381 -
Mal2g1573 1188 SMART serkin_6 875 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1573 1188 PRINTS Leucine-rich repeat signature 697 710 - -
Mal2g1573 1188 PRINTS Leucine-rich repeat signature 316 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1573 Mal-Chr2 18965733 18969299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1573 37 1184 Receptor kinase-like Gene Family AT4G39400 67.986 0.0 1513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mal2g1573 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1573 K13415 - gmx:100799772 1833.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1573 2 18965733 18969299 Mal2g1573 2 18965733 18969299 ECH