Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1570 ATGTGTATGTTAAAGGTGGCGAATCCAAGTGACAAAGTTGTTATCAAAAGGGAATTCAATGATGATCCCACATTTTCAACTGAAATGATATTTCCAGGTTTGAATAGGGATAGAGAAATGTCTGCAATGATCTCAGCTTTGACTCATATCGTTTCTGGAGATGTTCCAATCCAAAGAGGTGTTGATTTAATTCATCATAATAGTGCAGTTGAAGGAAGAGTTGCTTTTACACCAAATATCAATAACAACATGTCTTCTCCTTCTTCTTCATCTAATTATGCTGCTAGTTCTTCTCTCAAGAGAACTAGAGAAGATGATAGATCCAATATTGTTGCAGAAAGTTCAAGCATGAATAGGACAGCAACAAGAATAACAAGAGAAATGGGAAATGCAGTCTACGAATACCGAAGAACAGAGAATGTAGTAAGAGAAGGAGAACAAAAGAGAAAATACAGAGGAGTGAGACAGAGACCATGGGGAAAATGGGCAGCAGAGATAAGAGATCCATTCAAAGCAGCAAGAGTATGGTTAGGTACATTTGAAACAGCTGAAGCAGCTGCTAGAGCATATGATGAAGCTGCTCTTCGTTTCAGAGGCAACAAAGCTAAACTCAATTTCCCTGAAAATGTTACACTTCGTAACCCTCCACCAGCTACTACTACTCAATGGAATGTTTCGAATTTGCCAACTTCAATTGTTTCTATTACAACTTCTACTGACCCTGTTGTTCATACTAGACCTTTTCCTAACTCTTCTCAGCCTTCAACAAACTTTTATGATCGTTTTCAGTTTTCTGGTATTCCTGCTGCAAGGAATGTTTATGATGATAATGTGATTTTGACTTCTTCTATGGCTTCTCATTTTCATTCATCTTTGTCACCGGCTTCTTCATTGTCATCATCTTCTTCTGCATTTGCTTCATCTATACAAGCCAATACTTCGGCTTCTTCGTTTTATTCTTCTCAGTTGCCACCGTGGTCAGCTTCCGATCATAGCTCTTCTTCCTCTAGATGA 1014 0.3836 MCMLKVANPSDKVVIKREFNDDPTFSTEMIFPGLNRDREMSAMISALTHIVSGDVPIQRGVDLIHHNSAVEGRVAFTPNINNNMSSPSSSSNYAASSSLKRTREDDRSNIVAESSSMNRTATRITREMGNAVYEYRRTENVVREGEQKRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFETAEAAARAYDEAALRFRGNKAKLNFPENVTLRNPPPATTTQWNVSNLPTSIVSITTSTDPVVHTRPFPNSSQPSTNFYDRFQFSGIPAARNVYDDNVILTSSMASHFHSSLSPASSLSSSSSAFASSIQANTSASSFYSSQLPPWSASDHSSSSSR* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1570 337 MobiDBLite consensus disorder prediction 318 337 - -
Mal2g1570 337 Gene3D AP2/ERF domain 149 209 IPR036955 GO:0003700|GO:0006355
Mal2g1570 337 PRINTS Ethylene responsive element binding protein signature 173 189 IPR001471 GO:0003700|GO:0006355
Mal2g1570 337 PRINTS Ethylene responsive element binding protein signature 151 162 IPR001471 GO:0003700|GO:0006355
Mal2g1570 337 SUPERFAMILY DNA-binding domain 150 208 IPR016177 GO:0003677
Mal2g1570 337 CDD AP2 150 209 IPR001471 GO:0003700|GO:0006355
Mal2g1570 337 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 35 333 - -
Mal2g1570 337 Pfam AP2 domain 150 199 IPR001471 GO:0003700|GO:0006355
Mal2g1570 337 PANTHER DNA-BINDING DOMAIN 35 333 IPR044808 GO:0003700|GO:0009873
Mal2g1570 337 SMART rav1_2 150 213 IPR001471 GO:0003700|GO:0006355
Mal2g1570 337 MobiDBLite consensus disorder prediction 80 109 - -
Mal2g1570 337 MobiDBLite consensus disorder prediction 80 98 - -
Mal2g1570 337 ProSiteProfiles AP2/ERF domain profile. 150 207 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1570 Mal-Chr2 18871562 18873089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1570 148 212 AP2-EREBP Transcription Factor Family AT5G61890 84.615 4.87e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g1570 AP2 2.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1570 - - mtr:MTR_3g095190 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1570 2 18871562 18873089 Mal2g1570 2 18871562 18873089 ECH
Mal7g4687 7 115021005 115022312 Mal2g1570 2 18871562 18873089 ECH