Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1559 ATGGATTTGGATGATTTTCGATCTATATTAGATACGGCGGGCGTTGACGTATGGATGTTCATCGACACCGCGATTTCCGTCGCTTCTCTAGATAACGCCGGCGAGTTAAAGCGGAGAAGAGACGGAATCGTTGAGCGTCTCTACGCGGCCACTACGGCGGTTACTCCGATTTGTCAGAATTGCGACGGCGGTCAACGTTTGGTGACAAACGACAACCAAATCAAGAAAGAGAATAGTCCTAGTCTGAGTCCGGAACGAGGACAACGCCGCGGCGGAGCTTCATCTCCTCCGACGCCGCAGTCTGAAGGAAATGAGGATGGTGAAGATGAAGAGATAGATCCTTACGGTGGTTTGTTTGATGATGAGCAAAAGAAGATTCTAGAGATTAAAGAGCTTCTAGAAGATCCTCATCAGTCTGAAGATTCTTTGATGGAGTTGCTGCAAAATCTGGTGGATATTGATATTACATTCCAAGAGTTGAAGGAAACTGACATAGGGAGGAATGTGAATCAATTACGGAAACATCCATCCAGTGATGTTCGCCGATTGGTGAAGCTACTAATCAAGAAGTGGAAAGAAATTGTTGATGAGTGGGTGAAGCTAAATCGACAAGGAGGGAAAAGCACTCTCATTGCTGATGGAGACTCTCCTTTGCAGAAAACCACCCCAAATGGGCATAATCATCAGATTCCTGATTTTGCGTACTCTCCAAATCCACACAATGGAAGCTCTGGTTCTGACCGAAACACCTCCGAAGCAGAACCAAAACCAAAACCTAAACCAGTTCCTCGCAAAGACCCACCTCCTAAACCAAGGCCATCACCCCCAGTTACAGCCCCTACTTCTATTCCTCAAAATAGACAAAGAGAACAGAAAGAGAGCAATTTTGATGCAGAGAGGCTTGCTGCTGCAAGAAAACGGCTTCAAGAGAACTACAAAGAGGCTGATAATGCAAAAAAGCAAAGAACGATTCAGGTGATGGACATACACGAGTTACCTAAGTCAAAAGCAAAGAATGGTTACTTTGCAAAGAACAAAGGTGGTGGCAGTTCTCAGGGAAGACAGCATTGGTGA 1074 0.4544 MDLDDFRSILDTAGVDVWMFIDTAISVASLDNAGELKRRRDGIVERLYAATTAVTPICQNCDGGQRLVTNDNQIKKENSPSLSPERGQRRGGASSPPTPQSEGNEDGEDEEIDPYGGLFDDEQKKILEIKELLEDPHQSEDSLMELLQNLVDIDITFQELKETDIGRNVNQLRKHPSSDVRRLVKLLIKKWKEIVDEWVKLNRQGGKSTLIADGDSPLQKTTPNGHNHQIPDFAYSPNPHNGSSGSDRNTSEAEPKPKPKPVPRKDPPPKPRPSPPVTAPTSIPQNRQREQKESNFDAERLAAARKRLQENYKEADNAKKQRTIQVMDIHELPKSKAKNGYFAKNKGGGSSQGRQHW* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1559 357 Coils Coil 298 325 - -
Mal2g1559 357 MobiDBLite consensus disorder prediction 70 117 - -
Mal2g1559 357 MobiDBLite consensus disorder prediction 70 85 - -
Mal2g1559 357 MobiDBLite consensus disorder prediction 207 357 - -
Mal2g1559 357 MobiDBLite consensus disorder prediction 214 250 - -
Mal2g1559 357 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 124 206 IPR035441 -
Mal2g1559 357 ProSiteProfiles TFIIS N-terminal domain profile. 121 198 IPR017923 -
Mal2g1559 357 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 357 - -
Mal2g1559 357 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 357 IPR044790 -
Mal2g1559 357 MobiDBLite consensus disorder prediction 251 267 - -
Mal2g1559 357 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 120 208 IPR035441 -
Mal2g1559 357 Pfam TFIIS helical bundle-like domain 146 195 IPR017923 -
Mal2g1559 357 SMART TFS2_5 126 197 IPR003617 GO:0005634
Mal2g1559 357 MobiDBLite consensus disorder prediction 290 337 - -
Mal2g1559 357 CDD TFIIS_I 123 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1559 Mal-Chr2 18769713 18771611 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mal2g1559 Med26 8.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1559 - - aip:107622503 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1559 2 18769713 18771611 Mal2g1559 2 18769713 18771611 ECH