Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1558 ATGAGACCTCTTCTCCGAAAGAATCTATTGTTTTTCGCTTCATCTCGCACGCTTTTTGTGCGGCTCCACCTGTGCGAGTTTTCATCTTCTAATGCTCCGTATTCTCACTGGAAGCGTCTCGATGATGAGTCACGGAACGTTAAGGTTTCGGTATGGTGGGATTTCGAGAATTGCGGCGTGCCGGCCGGTGTTAATGTTTCCAAAGTAGCACCGTCAATTACGGATGCCGTTAGAGCTAATGGGATTAAAGGTCCTATTCATATTACAGCTTTCGGCAATGTGATGCAGCTTTCGAGGCCGAATCAGGAAGCTCTTGCTTTCACTGGGATTCATCTTACTCACATTCCTAATGGTGGGAAGAATAGTGCTGATAGGTCTCTTCTTGTTGATCTTATGTATTGGGTTTCCCAAAATCCTCCGCCTGCACATCTCTTTCTGATATCTGGTGATGGAGACTTTGCTGGCATATTGCACCGGTTAAGGATGAATAACTACAATATCTTGCTTGCGATTCCTGGAAAGGCTCCTGATGTTCTCTGCAGTGCAGCAACCATAATGTGGCAGTGGCCTTCATTGCTCAAGGGAGAAAATCTAACTGGGAAACATTTCAACCACCCTCCTGATGGTCAGTTTGGTTCTTGGTATGGAAATTCTAAAGTGCCTCTTGAAAACCCCTTTTCAGCTGCTGAACAGTCTACATCATCACAAAATGTACAAATTGTGGAAATCAACGAACCTTCCTCAGACTCAAAGTTACTTGAAGGAATTCCAAAGTCAGTTATAAGGCGGATTAAGCATATATTGAGTTCACATCCAAATGGTATCTCCATATCAGATCTTCGTGCAGAGCTGACAAAACGTGACGTGTCTTTGGGTAAAAACATATTTGGATATAAAAGGCTTTCCCGCTTTCTATCATCAATACCACATGTATATCTCCAGAATTTAGGAGATGGTAATTTTTGTGTGTATTTGATCTCCTCAGAGTCCCCCGAACCCTCTGAGAGAATCACTGCACCGTCAACCGCATATGCTGTTAAGAATGAGGAGAGAGTCTACACAACAACTCCAAAGCTACACAGTCAAGATAAAGACATGGATAAAGACGAATACATGACTCCCTCAATGTCTTCATTGCAAGAAAGTATCGTCGAGGATGATTCAAAATCATTCCAATTTGTCCCTTCACAAGAAAAACCTATCAGGGAAGATGCGACACGTAAATCATGGGGCTATACAACAACTCCAAAGCTACACAGTGAAGATAAAGACATGCACAGAGACGGACATAGGACCCCCTCAATGCCTTCATTGCATGAAAGGATCATTGAGGATGATTCAAAATCATTCCAATCTATACCTTCACAACGAAAACCTATTGAGGAAGATGTGTCGCGTAAATCATCTATAAGCAGTGAGAAGGTTGAGGATGTGTCTAATGTACAACTGTTGGAGAGTCAATTTTCACCAAAGCACAATGATGTTTCCAAAACTGAGATTGGTTCCTTTAAAGTGAAGAAATCTGAAAAGTTTTCTGATGATAAAATTGTTAGGTCTGAGGATGCAAGTCCAAAAGTTATTGAAAAATTTACGACTTCAGGGGATCCCTCTGCTGGTTTTGATCACACGATGGTGGAAAACAAAGATAAAGCAAATTGTGAATCTGGAAAATCTATAGCGAAGAAAACACATGAGAATCAAGCTGTAAAGGAGGTTGATGATCACAGCCCATATTCTTCAGCAGATGATGACTCTCTGGTCGACAAAAGACTCGATAGTCGTGCTGAAACTTACAGCAAAAGATCAACTTTCTTTAGCTGGATTGGAAGTTGGTGGCCATTTTGGAAAAGCAATGTGAAGGTTGGTGGTTTGACTGCTCATCAGAACAATGTGGGCAGTAATTTTGAGGATTCCAAGTTAACTGAACTGAACCAGACTGCTGGTAATCTTGAAGAGCCCAAACCATTAGAACCACACCAGGATGTAAGTAATTCTGGAAATCCCGAGGATTCCAAGTTATCTGAACTGGACCAGACTGCTAGTAATCTTGAAGAGGCCAAGCCATTAGAACCACATCAGGATGTCAGTCGGTCTGGAAAGCCCGAGGATTCTAAGTTATCTGAAATGGACCAGACTTCTAGTAATCTTGAAGAGCCCAAGACATTAGAACCACACCAGGATGCCAGTCATTATGGAAAGCCTGAGTTATTTTCTAGAGGTTCCTTTTGGAATGACATGGAATCTTTTGTTTTCACCCCCAAAGGATCACTTCTTATTTCCCAGTCTAAAAGCAGGGATGATTTGGCCCATACATTACAAAAGCATGGACCAGTGGTTCTTAAATCTCTTACTGAAAATGATGTCTTTCAATTGGTGGCATTGTTAATATCAGAAAAAAAATGGTTGGAGGAAAGCACCTCACAAGCATTTCCTTTTCGGCTAACCCATTCAGTTCAGAAGAGTGCACTGTCGGGCCACACTAATGGTGCAAATGGTTTGAGATCTCTCTTTCTAAGTAAAACATCGCAGTCCAACTTGCAAAAGTCATTTGAACATGACGGGGAGAGAAACACTCAGGGTATTCAGCAAACGAGAGTTTCCAGACCTACCACTGAAATAAAATATACTGAGAAGTCTAGAAGGGATATACTACAAGATTGTCGGAAACTGGTAACTGATACATTGAAGGAACACCCAGAGGGATGTAATATAGCTTCTTTTCGGCAACAATTTGCTGATAGATATGGCTATAACCTTGATATCAAGAAGCTTGGTTATCAGAAGATATCATACTTGATGAAGAATATGCCTGGGGTTAAATTAGAATCCACTTTTTCCAAAAAAAATAAAAAATCAGAATCTATTTATATGTATCCTTCTGCTCCTGCTGTTTGTGCTTCTGACTCAGAAACTTCTATCCTCAAAACTCAACCAACCAATTCTAGTCATGAACAATTCAACTCAGATGATGAATTATCTGATAGTGTCGCAAATGAGGAATCATCTTGGGAGGAATTAGGTCCTGTTTCTGCTAAAAATCTCAGTCAGAATGATCTGATTTCAAATTTAACTCTGAAAGCCATTGAACTGGATACACCAAAGCATCCTGATTATGAACCCATTGTCTCAGATGATGATTCTTCTGAATCTGAAGATGATAGCTCTTGTTTAACTCAACCAGAAGAGCTAAGAAAGCCAAAACATGATGAAATATGCAGCTCTCTTTTTCAAACTTTGGAATCCTTCCATAGCAGAAAGGAAGGAGATAATAGTGTTGATGCTCGGGTTAACAACATCTTAGATTCATCCAAAGCCTCAAAACAGGGTATTGTTTCCAAAAATACTTCAGGGAATTACAGAGAAAAGCAAAAATTTCAAAAGTATAATTTTGTTGATGACCCAGCCTTACCTGACAACGACAAGTGTTTTGGTGGGCTACTAGATAGCTCAAAGAAAGAGGATAGTGTGAAGATGCAAAACTGA 3483 0.4045 MRPLLRKNLLFFASSRTLFVRLHLCEFSSSNAPYSHWKRLDDESRNVKVSVWWDFENCGVPAGVNVSKVAPSITDAVRANGIKGPIHITAFGNVMQLSRPNQEALAFTGIHLTHIPNGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDGDFAGILHRLRMNNYNILLAIPGKAPDVLCSAATIMWQWPSLLKGENLTGKHFNHPPDGQFGSWYGNSKVPLENPFSAAEQSTSSQNVQIVEINEPSSDSKLLEGIPKSVIRRIKHILSSHPNGISISDLRAELTKRDVSLGKNIFGYKRLSRFLSSIPHVYLQNLGDGNFCVYLISSESPEPSERITAPSTAYAVKNEERVYTTTPKLHSQDKDMDKDEYMTPSMSSLQESIVEDDSKSFQFVPSQEKPIREDATRKSWGYTTTPKLHSEDKDMHRDGHRTPSMPSLHERIIEDDSKSFQSIPSQRKPIEEDVSRKSSISSEKVEDVSNVQLLESQFSPKHNDVSKTEIGSFKVKKSEKFSDDKIVRSEDASPKVIEKFTTSGDPSAGFDHTMVENKDKANCESGKSIAKKTHENQAVKEVDDHSPYSSADDDSLVDKRLDSRAETYSKRSTFFSWIGSWWPFWKSNVKVGGLTAHQNNVGSNFEDSKLTELNQTAGNLEEPKPLEPHQDVSNSGNPEDSKLSELDQTASNLEEAKPLEPHQDVSRSGKPEDSKLSEMDQTSSNLEEPKTLEPHQDASHYGKPELFSRGSFWNDMESFVFTPKGSLLISQSKSRDDLAHTLQKHGPVVLKSLTENDVFQLVALLISEKKWLEESTSQAFPFRLTHSVQKSALSGHTNGANGLRSLFLSKTSQSNLQKSFEHDGERNTQGIQQTRVSRPTTEIKYTEKSRRDILQDCRKLVTDTLKEHPEGCNIASFRQQFADRYGYNLDIKKLGYQKISYLMKNMPGVKLESTFSKKNKKSESIYMYPSAPAVCASDSETSILKTQPTNSSHEQFNSDDELSDSVANEESSWEELGPVSAKNLSQNDLISNLTLKAIELDTPKHPDYEPIVSDDDSSESEDDSSCLTQPEELRKPKHDEICSSLFQTLESFHSRKEGDNSVDARVNNILDSSKASKQGIVSKNTSGNYREKQKFQKYNFVDDPALPDNDKCFGGLLDSSKKEDSVKMQN* 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1558 1160 MobiDBLite consensus disorder prediction 459 473 - -
Mal2g1558 1160 MobiDBLite consensus disorder prediction 549 586 - -
Mal2g1558 1160 CDD LOTUS 257 325 - -
Mal2g1558 1160 PANTHER LIMKAIN B LKAP 14 1106 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal2g1558 1160 CDD PIN_limkain_b1_N_like 48 172 - -
Mal2g1558 1160 MobiDBLite consensus disorder prediction 417 447 - -
Mal2g1558 1160 MobiDBLite consensus disorder prediction 687 707 - -
Mal2g1558 1160 Gene3D - 257 331 IPR041966 -
Mal2g1558 1160 ProSiteProfiles OST-type HTH domain profile. 256 327 IPR025605 -
Mal2g1558 1160 MobiDBLite consensus disorder prediction 975 1009 - -
Mal2g1558 1160 CDD LOTUS 884 939 - -
Mal2g1558 1160 MobiDBLite consensus disorder prediction 660 681 - -
Mal2g1558 1160 Gene3D - 878 948 IPR041966 -
Mal2g1558 1160 MobiDBLite consensus disorder prediction 1031 1064 - -
Mal2g1558 1160 MobiDBLite consensus disorder prediction 412 477 - -
Mal2g1558 1160 Pfam OST-HTH/LOTUS domain 259 311 IPR025605 -
Mal2g1558 1160 Pfam OST-HTH/LOTUS domain 884 943 IPR025605 -
Mal2g1558 1160 Pfam NYN domain 48 183 IPR021139 GO:0004540
Mal2g1558 1160 ProSiteProfiles OST-type HTH domain profile. 883 961 IPR025605 -
Mal2g1558 1160 MobiDBLite consensus disorder prediction 649 733 - -
Mal2g1558 1160 Gene3D - 41 188 - -
Mal2g1558 1160 PANTHER EMB|CAB71880.1 14 1106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1558 Mal-Chr2 18760540 18764801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1558 47 195 C2H2 Transcription Factor Family AT5G61190 44.295 3.62e-36 147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1558 2 18760540 18764801 Mal2g1558 2 18760540 18764801 ECH