Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1541 ATGTATGCTACTACATCCTTTGTTTCACCATTCCTCCATGACCTTGTTGGAAATTTCCACTCAAGAAGGTTACTCCTTCACTCATCCAATTCAGCCAACCCTCCAATTTCCACAAACATCCATGATTCAACTAAAGAATCATCATATCTTGGAGATGGTAATTTTGATGCAAATGTTGTTATGGTACTCTCTGTCCTATTATGTGCTCTTATTTGTTCACTTTGTTTGAACTCAATTATAAGGTGTGCATTAAAATGTTCCAATTTAGTTGTGATGAGTGGTCATCACTCCGAGAACAATACTCCAGTTCGAGCGACAAACACAGGAATCAAGAAGAAAGCTCTCAAAAAATTCACCACAGTTAGTTACTCAGATGAGCTAAACTTGCCAAGTTTGGACTCGGAGTGTGTGATATGTTTGTCAGAGTTCACTAACGGCGATAAAGTGCGCCTTTTGCCAAAGTGTAACCATGGATTTCATGTTCGTTGCATTGACAAATGGCTAAGTTCGCATTCGTCTTGTCCGAAATGTAGACAGTGTCTTATTGAGACTTGTAAAAAAATTGTTGGGTCACAAGGTAGTTCATCTCAACCACAACCTATGTTGTTTCCAGTGCCAGAAACAATTGTAACTATAGCACCACTAGAGCCAGAAGTTTTGGTGCGCAATTATAGGGAGGTTAGCTAA 687 0.393 MYATTSFVSPFLHDLVGNFHSRRLLLHSSNSANPPISTNIHDSTKESSYLGDGNFDANVVMVLSVLLCALICSLCLNSIIRCALKCSNLVVMSGHHSENNTPVRATNTGIKKKALKKFTTVSYSDELNLPSLDSECVICLSEFTNGDKVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCKKIVGSQGSSSQPQPMLFPVPETIVTIAPLEPEVLVRNYREVS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1541 228 PANTHER RING-H2 FINGER PROTEIN ATL78 1 227 IPR044602 GO:0016567|GO:0016740
Mal2g1541 228 SUPERFAMILY RING/U-box 114 183 - -
Mal2g1541 228 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
Mal2g1541 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 182 IPR013083 -
Mal2g1541 228 SMART ring_2 136 177 IPR001841 -
Mal2g1541 228 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 227 - -
Mal2g1541 228 CDD RING-H2_PA-TM-RING 135 178 - -
Mal2g1541 228 Pfam Ring finger domain 135 178 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1541 Mal-Chr2 18445262 18445948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1541 23 182 C3H Transcription Factor Family AT3G10910 46.061 8.25e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1541 K19040 - gmx:100787934 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1541 2 18445262 18445948 Mal2g1541 2 18445262 18445948 ECH
Mal7g4710 7 115315433 115316110 Mal2g1541 2 18445262 18445948 ECH
Mal7g4705 7 115251132 115251791 Mal2g1541 2 18445262 18445948 PCT