Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1522 ATGAGTGGAACTGGCAGAAGGCACTCTTCAAAGTGGGATCTGAGTGATGAGCACAAATTCATACCTGGTAGCAAGCAAATGCGGTCTGGGCGGTCCTCTGCAGATGTTGCTGGTAACAATAGTTCAGAATGGGCTTATTCGGAAGGAAATGATAAGTTAAGACCTGTTATGGGATTTTCATCAAAGGAGCCTTTTTATGGAGGCCGAGGTTCAAATGAGGATGATGCTATGAATAAAGACCATAGAGTTTTGGATACAAGAAGAGAATGGGACACCGATGGAAGTTACAGCAAGAAAACGTCTCCTTGGGTAGAGGAATGGAAACAAAATAGACACAGTCAATCCCCTGAAAATGATTGGAGCAGGAGCAGTCGGAGCCGGAGTCGGAGCCCTCCTCGTGGTTTTAGGTGGGATTCAGGAGTTGACGATAGAAAAAGGATGAGGGTTGGAGGATCAACACGACCGTGCAGAGAGTTTGCTGCTGGAAAATGTAGAAGAGGCAGTCATTGCAATTTTCTGCATCATGATAACCAAAATCGTGAGAATAGTTGGGAAGGTAAGCACAGGGAAGATGGAGCTCCCAGATACTCTGCTGCCCATGAGAGCGTTGACCATTCTTTTGAGAGTGGTAGATCTAATGAAGCTTGTATAAATTTTGCAAAAGGCAGTGGTAGAATGGGAGCATCTCGCAAGTCTGTGCATGATATCGATTCTGATGGATATGGTCAAGTTTCTATGGATGAATTCACTAGAGAAAGGGAAGATGGAGCTCCCAGATATCCTGCTACCCGTGAGAGCAGGCACCATTCTCTTAGGAGTGGTAGATCTAATGAATTCACTAGAGAAAGGGAAGATGGAGCTCCCAGATATCCTACTACCCATGAGAGCAGGGACCATTCTCTTAAGAGTGGTAGATCTAATGATGGATATGGCAAAGTTTTTATGGATGAATTCACTAGAGAAAGAGATATTGACAGAAGGCACAGAGATAATTCTTTTGAGCAGGGTGGCCGGCATGTGCCTAACCGCACTAGTGATACTCCTTGCAAATTTTTTGCTAATGGAAATTGTCGAAATGGTAAATATTGTAGGTTTTCTCACGATAGGCAAGCATGTAGGAGCCCTAATAGAAGATTAAGGGATGATAGATGGGCAAGAAATCCAGGTAGAGATCATCAAATGTTGGATAGACAAAAATTGAGTGATTCCATTAGTCCAAAGAAAAGGCTAAGAGATGATAGGTGGGGTTCGGATAGCGATGTGGCTGATCCAGATAGAGTTAGGGACAGTCCAAAGCGGAATGGTACAGTTTCTGCCTCTGATACAGCAAAGCTGTTCGAGAATAAAAGTGGAAATTTAGGTGCCACAGAGCCAGGATTTACTGATTTGCCTATAACGGGTGAATGGGGGCATGATTTAGATAAGAGCAGGCTGCATGGTAAACCACCAATTTTGAGTGATAAGAACGAAGCTGATCATTGGATAGCAGAAAATACTGATGCCAACTTGCATGGTTCCCAGTCAATAGGTACAACAGACATTTGGCCGGGTGATGCAGAAATGTCTCCTGATTGGAATTATAAGATGGGATCTTCCAGTCATATGGAAGAACATGGACAGAATGAACATGGTGTAAGCCAGGGTGGTTCGTATTTAGCCATCTCTGAACACAACAGAATACAACTTGCTCCAGGACAAAACATCAATCAGAATACACAGAATGTAAATCCTTTGCATACTTCCAGCTACCCTGCAGTTGGACAAAGTCAAGTGGATGTTCCCATTCTTCCTTCACGAGAAGGCATTGTTGATGCTACACACAGCCAAGAAGTATCTACTGAGCAAAAGTACACTGAGCAAAAGTACACCGGAGAACCAAATATTATGGATTCAGGCTTATCACAAGTTAGTTCAATAAATGCTCCAGTTCAAAAGTACACCGGAGAACCAAATATTATGGATTCAGGCTTATCACAAATTAGTTCAATAAATCCTCCAGTTCAAAATGTAGTAAGCAATGAACAGCTTGCTCAACTCACGAATCTCTCAGCCTCTCTGGCTCATATCCTTGGAGCAGGTCAGCAGCTTCCGCAGCTATATGCTGCTTTAAATTCTCACGAATCAAACGACAGTCCTTCCCAAGCAAAAACTCAAGTGCCTGCAATGCCTGTTTCAATCACATGCATCAAGCCAGATCCTGCCGATGGACTCCCAAAACAGTATGATCCAATGAATGATGGTATTGAGCAAAAGAATGCTGATGCAAGTGGTGTACCCCCAGCCATTCCTCCAAGTAAAAATATTGCCGAAGTAGAAATTCTGTCACAGTTGTCTAACCCAGGAAGACAAAATTTTGGTAATTCAAATAAGAGTGTCTCCTCAGAACTTGTCAAGAGTGATAATCTAATCCATTTGCAGCCTGGTCAAAACACGGTGGTTAATAAGGATAATAATGAAGAGGTAGCTAAGGAAAGGAAAAATTCTCATGATGCTCATAAAAGTACAAAAGAGAATGGTCCGCAAAACATGGAGCAAAATGCTATACCTGATGATGCCAAGCAGACAAAGGAAATGAAAGGGGCTCGCGCATTTAAATTTGCATTGGCTGAGTTTGTTAAGGAGCTTCTGAAACCAACTTGGAAAGAAGGTAAAATCACTAAAGAAGATTATAAAACAATTGTGAAGAAAGTTGTTGATAAAGTAACGGGTACCATCCAGGAGGCTAATATTCCGCAGACACAAGAGAAAATTGACCAATATTTGTCATTTTCAAAACCAAAGCTTAACAAACTTGTACAGGCATATGTGGAAAAGGTTCAGAAGGGTTAG 2829 0.4221 MSGTGRRHSSKWDLSDEHKFIPGSKQMRSGRSSADVAGNNSSEWAYSEGNDKLRPVMGFSSKEPFYGGRGSNEDDAMNKDHRVLDTRREWDTDGSYSKKTSPWVEEWKQNRHSQSPENDWSRSSRSRSRSPPRGFRWDSGVDDRKRMRVGGSTRPCREFAAGKCRRGSHCNFLHHDNQNRENSWEGKHREDGAPRYSAAHESVDHSFESGRSNEACINFAKGSGRMGASRKSVHDIDSDGYGQVSMDEFTREREDGAPRYPATRESRHHSLRSGRSNEFTREREDGAPRYPTTHESRDHSLKSGRSNDGYGKVFMDEFTRERDIDRRHRDNSFEQGGRHVPNRTSDTPCKFFANGNCRNGKYCRFSHDRQACRSPNRRLRDDRWARNPGRDHQMLDRQKLSDSISPKKRLRDDRWGSDSDVADPDRVRDSPKRNGTVSASDTAKLFENKSGNLGATEPGFTDLPITGEWGHDLDKSRLHGKPPILSDKNEADHWIAENTDANLHGSQSIGTTDIWPGDAEMSPDWNYKMGSSSHMEEHGQNEHGVSQGGSYLAISEHNRIQLAPGQNINQNTQNVNPLHTSSYPAVGQSQVDVPILPSREGIVDATHSQEVSTEQKYTEQKYTGEPNIMDSGLSQVSSINAPVQKYTGEPNIMDSGLSQISSINPPVQNVVSNEQLAQLTNLSASLAHILGAGQQLPQLYAALNSHESNDSPSQAKTQVPAMPVSITCIKPDPADGLPKQYDPMNDGIEQKNADASGVPPAIPPSKNIAEVEILSQLSNPGRQNFGNSNKSVSSELVKSDNLIHLQPGQNTVVNKDNNEEVAKERKNSHDAHKSTKENGPQNMEQNAIPDDAKQTKEMKGARAFKFALAEFVKELLKPTWKEGKITKEDYKTIVKKVVDKVTGTIQEANIPQTQEKIDQYLSFSKPKLNKLVQAYVEKVQKG* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1522 942 Gene3D - 151 239 - -
Mal2g1522 942 PANTHER ZINC FINGER CCCH DOMAIN PROTEIN-RELATED 253 940 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 370 462 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 433 449 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 223 311 - -
Mal2g1522 942 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 153 175 IPR000571 GO:0046872
Mal2g1522 942 MobiDBLite consensus disorder prediction 801 816 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 326 347 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 1 151 - -
Mal2g1522 942 SUPERFAMILY CCCH zinc finger 345 368 IPR036855 GO:0046872
Mal2g1522 942 MobiDBLite consensus disorder prediction 73 95 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 168 210 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 522 547 - -
Mal2g1522 942 SMART c3hfinal6 152 176 IPR000571 GO:0046872
Mal2g1522 942 SMART c3hfinal6 343 369 IPR000571 GO:0046872
Mal2g1522 942 ProSiteProfiles Zinc finger C3H1-type profile. 150 177 IPR000571 GO:0046872
Mal2g1522 942 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 254 - -
Mal2g1522 942 PANTHER ZINC FINGER CCCH DOMAIN PROTEIN-RELATED 1 254 - -
Mal2g1522 942 Gene3D - 340 398 - -
Mal2g1522 942 ProSiteProfiles Zinc finger C3H1-type profile. 343 370 IPR000571 GO:0046872
Mal2g1522 942 MobiDBLite consensus disorder prediction 801 847 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 116 130 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 9 24 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 26 47 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 817 837 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 136 151 - -
Mal2g1522 942 Pfam CCCH-type zinc finger 348 368 IPR041367 -
Mal2g1522 942 MobiDBLite consensus disorder prediction 168 208 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 370 432 - -
Mal2g1522 942 MobiDBLite consensus disorder prediction 246 305 - -
Mal2g1522 942 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 253 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1522 Mal-Chr2 18241091 18246042 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal2g1522 zf-CCCH 5.4e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1522 - K22909 gmx:100783856 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1522 2 18241091 18246042 Mal2g1522 2 18241091 18246042 ECH
Mal2g1522 2 18241091 18246042 Mal7g4727 7 115569574 115574198 ECH