Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1513 ATGGCTACCGACGCATCCCGTCAGCTCTCTCAAAAGGAAGCTGATATCCAAATGATGTTGGCTGCCGATGTACATCTCGGCACCAAGAACTGTGACTTCCAAATGGAGCGTTATTGTTTCAAACGCCGCAATGATGGTATTTATATTATTAATCTTGGAAAGACATGGGAGAAACTTCAACTTGCTGCTAGGGTTATTGTTGCGATTGAGAACCCTCAGGACATTATTGTCCAATCTGCAAGGCCTTATGGACAGAGAGCCGTTCTTAAGTTTGCTCAGTACACCGGCGCAAATGCTATTGCTGGAAGACACACTCCCGGAACCTTTACAAATCAAATGCAAGTTTCCTTTAGTGAACCTCGTCTTCTCATCCTCACTGATCCTAGAACTGATCACCAGCCAATCAAGGAAGCTGCTCTTGGAAATATTCCCACAATTGCTTTCTGTGACACTGATTCTCCTATGAGATATGTTGACATTGGAATTCCTGCTAACAACAAAGGGAAGCATAGCATAGGTTGTCTATTTTGGCTTTTGGCTAGGATGGTTTTGCAAATGCGTGGTACTATTCGCCCTGGTCTTAAGTGGGATGTGATGGTGGATCTCTTCTTCTATAGAGAACCCGAAGATGCCAAGGAGCAAGAGGAGGATGAAGCTCCAGCTCCAGATTATGCTATTGCTGATTTTAATGCAGCTTCTATCCCTACTGACGGACAGTGGCCTTCTGCAATTGATCAGCCATGGACTGATGCAGTTCCGGAACCTATTCCAGCGGTTCCTGCTGTCAACTGGGCAGCCCCAGAAGCTGGGGACTGGGGTGAAGCTGTTCCAGCACCACAACAAATACCTGCTCCTGGAGTTGAATCTATCCAAGCAACTGGCTGGGAATAA 891 0.4624 MATDASRQLSQKEADIQMMLAADVHLGTKNCDFQMERYCFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQVSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEDAKEQEEDEAPAPDYAIADFNAASIPTDGQWPSAIDQPWTDAVPEPIPAVPAVNWAAPEAGDWGEAVPAPQQIPAPGVESIQATGWE* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1513 296 ProSitePatterns Ribosomal protein S2 signature 2. 120 144 IPR018130 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 PRINTS Ribosomal protein S2 signature 158 172 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 PRINTS Ribosomal protein S2 signature 16 34 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 PRINTS Ribosomal protein S2 signature 46 55 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 PRINTS Ribosomal protein S2 signature 95 112 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 PRINTS Ribosomal protein S2 signature 137 148 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 PRINTS Ribosomal protein S2 signature 120 137 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 SUPERFAMILY Ribosomal protein S2 11 201 IPR023591 -
Mal2g1513 296 Pfam Ribosomal protein S2 19 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 Pfam Ribosomal protein S2 119 183 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 TIGRFAM uS2_euk_arch: ribosomal protein uS2 11 207 IPR005707 GO:0003735|GO:0006412|GO:0015935
Mal2g1513 296 CDD RPS2 19 185 IPR001865 GO:0003735|GO:0005840|GO:0006412
Mal2g1513 296 PANTHER 40S RIBOSOMAL PROTEIN SA 1 286 - -
Mal2g1513 296 Hamap 40S ribosomal protein SA [rps-0]. 3 275 IPR027498 GO:0003735|GO:0006412|GO:0015935
Mal2g1513 296 MobiDBLite consensus disorder prediction 271 296 - -
Mal2g1513 296 Gene3D - 15 220 - -
Mal2g1513 296 PANTHER 40S RIBOSOMAL PROTEIN SA 1 286 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1513 Mal-Chr2 18091783 18094484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1513 5 263 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 77.481 1.30e-149 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1513 K02998 - gmx:100805318 511.916