Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal2g1496 | ATGAACAAAGCTCAAACTGAAATCACTATCCCTCACTTGTTTAGATGCCCTATAAGTCTTGATTTGTTGGAAGATCCAGTGACTTTAACCACTGGCCAAACCTATGATAGATCAAGCATAGAGAAATGGATTTCTGCAGATTCTCATCTCTCAGAAAATCACATGGAATTTGTGGAGATAGCACTTTCTTGCATCCTTAAATTGTTACCTATTGTGAATTTGGAACCTCTAAATATCATCAAAGATGAATCTAAGTTGGAAAGGTTCATATTTTTATTTGAAAAAGGAACTAGTTCAATTAAGACTAGTTTGTGTCTTGTTATAGATTATTCAACAACAGCAACACAAACAGAAGAGGTTTGTGAAGTACTAGGAAACTCACAAAAACTAGTACATGATATTGTTCAAGTTGTTGTTAACCAAAATTGTGATAAGGTTTCTAAGGCTGCAATTAAGGCCTTATCAGCATTATGTTCATTGGAATCAAACAGAGAGAGTTTAGTAATAGGAGGAGCAATAGATGGAATCATAACATATATTTCAAGGTGTGAAAATGGACATAAGAGTTTGGCTCCACTTGCAATGGCAACAATGAAGAAACTTTTAGTGTTGGAGAGTGGTAAAGAGGCATTGGTGAATCATGTAAATGGTATTGAAACTTTGGTGAAGATGGTTTTCAAGGTGTGTAATCAAGAGTGTAGTGAGAGTGCTGTTGAGATACTTTCAATTGTTTGTAGTGATTTTGGGAGTGCTAGAGATGTAGCTATTGGAGCTGGTGTTTTGAGTCAGTTATTGTTTCTTCTGCAGAGTCAATGTGGTACCAAAACTAAAACTAAGGCAAGAATGTTGCTCAAGTTGTTGAGATCCAAGTGGAATGAGGAATCAATGCAGCTTTAG | 897 | 0.3579 | MNKAQTEITIPHLFRCPISLDLLEDPVTLTTGQTYDRSSIEKWISADSHLSENHMEFVEIALSCILKLLPIVNLEPLNIIKDESKLERFIFLFEKGTSSIKTSLCLVIDYSTTATQTEEVCEVLGNSQKLVHDIVQVVVNQNCDKVSKAAIKALSALCSLESNRESLVIGGAIDGIITYISRCENGHKSLAPLAMATMKKLLVLESGKEALVNHVNGIETLVKMVFKVCNQECSESAVEILSIVCSDFGSARDVAIGAGVLSQLLFLLQSQCGTKTKTKARMLLKLLRSKWNEESMQL* | 299 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal2g1496 | 298 | Pfam | U-box domain | 10 | 46 | IPR003613 | GO:0004842|GO:0016567 | |
Mal2g1496 | 298 | Gene3D | - | 111 | 297 | IPR011989 | - | |
Mal2g1496 | 298 | PANTHER | OS02G0542800 PROTEIN | 48 | 290 | - | - | |
Mal2g1496 | 298 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 59 | IPR013083 | - | |
Mal2g1496 | 298 | PANTHER | OS02G0542800 PROTEIN | 9 | 46 | - | - | |
Mal2g1496 | 298 | PANTHER | WDSAM1 PROTEIN | 48 | 290 | IPR045185 | GO:0061630 | |
Mal2g1496 | 298 | CDD | RING-Ubox_PUB | 14 | 45 | IPR045210 | - | |
Mal2g1496 | 298 | ProSiteProfiles | U-box domain profile. | 9 | 49 | IPR003613 | GO:0004842|GO:0016567 | |
Mal2g1496 | 298 | SUPERFAMILY | RING/U-box | 6 | 47 | - | - | |
Mal2g1496 | 298 | PANTHER | WDSAM1 PROTEIN | 9 | 46 | IPR045185 | GO:0061630 | |
Mal2g1496 | 298 | SUPERFAMILY | ARM repeat | 50 | 287 | IPR016024 | - | |
Mal2g1496 | 298 | SMART | Ubox_2 | 13 | 68 | IPR003613 | GO:0004842|GO:0016567 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal2g1496 | Mal-Chr2 | 17948032 | 17949246 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal2g1496 | 8 | 45 | U-box Gene Family | AT3G19380 | 71.053 | 2.20e-13 | 68.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal2g1496 | - | - | mtr:MTR_3g096370 | 531.176 |