Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1496 ATGAACAAAGCTCAAACTGAAATCACTATCCCTCACTTGTTTAGATGCCCTATAAGTCTTGATTTGTTGGAAGATCCAGTGACTTTAACCACTGGCCAAACCTATGATAGATCAAGCATAGAGAAATGGATTTCTGCAGATTCTCATCTCTCAGAAAATCACATGGAATTTGTGGAGATAGCACTTTCTTGCATCCTTAAATTGTTACCTATTGTGAATTTGGAACCTCTAAATATCATCAAAGATGAATCTAAGTTGGAAAGGTTCATATTTTTATTTGAAAAAGGAACTAGTTCAATTAAGACTAGTTTGTGTCTTGTTATAGATTATTCAACAACAGCAACACAAACAGAAGAGGTTTGTGAAGTACTAGGAAACTCACAAAAACTAGTACATGATATTGTTCAAGTTGTTGTTAACCAAAATTGTGATAAGGTTTCTAAGGCTGCAATTAAGGCCTTATCAGCATTATGTTCATTGGAATCAAACAGAGAGAGTTTAGTAATAGGAGGAGCAATAGATGGAATCATAACATATATTTCAAGGTGTGAAAATGGACATAAGAGTTTGGCTCCACTTGCAATGGCAACAATGAAGAAACTTTTAGTGTTGGAGAGTGGTAAAGAGGCATTGGTGAATCATGTAAATGGTATTGAAACTTTGGTGAAGATGGTTTTCAAGGTGTGTAATCAAGAGTGTAGTGAGAGTGCTGTTGAGATACTTTCAATTGTTTGTAGTGATTTTGGGAGTGCTAGAGATGTAGCTATTGGAGCTGGTGTTTTGAGTCAGTTATTGTTTCTTCTGCAGAGTCAATGTGGTACCAAAACTAAAACTAAGGCAAGAATGTTGCTCAAGTTGTTGAGATCCAAGTGGAATGAGGAATCAATGCAGCTTTAG 897 0.3579 MNKAQTEITIPHLFRCPISLDLLEDPVTLTTGQTYDRSSIEKWISADSHLSENHMEFVEIALSCILKLLPIVNLEPLNIIKDESKLERFIFLFEKGTSSIKTSLCLVIDYSTTATQTEEVCEVLGNSQKLVHDIVQVVVNQNCDKVSKAAIKALSALCSLESNRESLVIGGAIDGIITYISRCENGHKSLAPLAMATMKKLLVLESGKEALVNHVNGIETLVKMVFKVCNQECSESAVEILSIVCSDFGSARDVAIGAGVLSQLLFLLQSQCGTKTKTKARMLLKLLRSKWNEESMQL* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1496 298 Pfam U-box domain 10 46 IPR003613 GO:0004842|GO:0016567
Mal2g1496 298 Gene3D - 111 297 IPR011989 -
Mal2g1496 298 PANTHER OS02G0542800 PROTEIN 48 290 - -
Mal2g1496 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 59 IPR013083 -
Mal2g1496 298 PANTHER OS02G0542800 PROTEIN 9 46 - -
Mal2g1496 298 PANTHER WDSAM1 PROTEIN 48 290 IPR045185 GO:0061630
Mal2g1496 298 CDD RING-Ubox_PUB 14 45 IPR045210 -
Mal2g1496 298 ProSiteProfiles U-box domain profile. 9 49 IPR003613 GO:0004842|GO:0016567
Mal2g1496 298 SUPERFAMILY RING/U-box 6 47 - -
Mal2g1496 298 PANTHER WDSAM1 PROTEIN 9 46 IPR045185 GO:0061630
Mal2g1496 298 SUPERFAMILY ARM repeat 50 287 IPR016024 -
Mal2g1496 298 SMART Ubox_2 13 68 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1496 Mal-Chr2 17948032 17949246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1496 8 45 U-box Gene Family AT3G19380 71.053 2.20e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1496 - - mtr:MTR_3g096370 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1496 2 17948032 17949246 Mal2g1496 2 17948032 17949246 ECH