Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1493 ATGGGAGATATTGTCAAGCTTCCTCCTGGCTTTGTTTTCTCTCCAACAGATGAAGAACTTATCCTTCACTTTCTCTATTCTAAGGCTTCTCTTATTCCATCTCATTCAAACTTCATCCCTGATCTAGATCTGTCTCTACTTCTTCCTTGGGAATTAAATGATAAGGCATTGTGCGGTGGAAATGAAGAATACTATTTCTTCGCAAAAGTGAAGGAAAACAAATCCAGTACTGAAAATGGGTATTGGGAGGAAATTGGTGTGACAGAACCAATATTTTCAGGCACTGACCAGAAAGTGGGAATGAAGAAGTATCTAGTATTCCACATAGCACAAGGTGCTGAAACTAGTTGGGTAATGCAACAATATCATATTTGCTCCTCTGGATTTGATCACAGTATGGTTTCATATCATGGTGATGATAAAGTGGGTGAAAATTGGAGCGAGTGGATTTTATGCAGAGTCTATGAAACTGAAAAGAACATGTATTCTCAAGATGGTGTAAATTATTGCAACAGCGATGATGATGACAGTGGAACTGATCTTTCATGGCAAGACCAAGTTTTTCTGTCTTTGGAGTTGGATAATGATGACATGGAAGGAATAACCATGCCTCAGTAG 618 0.3867 MGDIVKLPPGFVFSPTDEELILHFLYSKASLIPSHSNFIPDLDLSLLLPWELNDKALCGGNEEYYFFAKVKENKSSTENGYWEEIGVTEPIFSGTDQKVGMKKYLVFHIAQGAETSWVMQQYHICSSGFDHSMVSYHGDDKVGENWSEWILCRVYETEKNMYSQDGVNYCNSDDDDSGTDLSWQDQVFLSLELDNDDMEGITMPQ* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1493 205 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Mal2g1493 205 Pfam No apical meristem (NAM) protein 8 124 IPR003441 GO:0003677|GO:0006355
Mal2g1493 205 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Mal2g1493 205 PANTHER NAC TRANSCRIPTION FACTOR 56 4 198 - -
Mal2g1493 205 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 198 - -
Mal2g1493 205 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1493 Mal-Chr2 17929753 17931189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1493 7 156 NAC Transcription Factor Family AT1G61110 36.420 2.31e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal2g1493 NAM 2.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1493 - - gmx:100170711 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1493 2 17929753 17931189 Mal2g1493 2 17929753 17931189 ECH