Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1474 ATGTCTGCAACTGGAAAGGGGAAGAAGAGGGAGGAGCACGACCACGCTTCCGATGACGATACTGAAGCTCACGCGCCGGCCAAAAAGACCCTCAAGAAAGATTCCGATGATAACTCCGATGACATCGTCTTTGAGATTGGGAAGAACAGAAGGGTTTCCGTGAGGATCTGGAAGGGTCAGACCTGGATTGACATTCGTGAATTTTACACCAAAGATGGCAAGCAGTTACCAGGCAAAAAAGGTATCTCATTGAACAAGGATCAGTGGATTGTGCTTCGTGATCACATTGGAGAAATTGACAATGCAGTCAAAGAGAAATCTTAG 324 0.463 MSATGKGKKREEHDHASDDDTEAHAPAKKTLKKDSDDNSDDIVFEIGKNRRVSVRIWKGQTWIDIREFYTKDGKQLPGKKGISLNKDQWIVLRDHIGEIDNAVKEKS* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1474 107 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 6 105 IPR045125 GO:0003713|GO:0060261
Mal2g1474 107 SUPERFAMILY ssDNA-binding transcriptional regulator domain 43 105 IPR009044 GO:0003677|GO:0006355
Mal2g1474 107 MobiDBLite consensus disorder prediction 1 41 - -
Mal2g1474 107 PANTHER BNAC09G47220D PROTEIN 6 105 - -
Mal2g1474 107 Pfam Transcriptional Coactivator p15 (PC4) 44 95 IPR003173 GO:0003677|GO:0006355
Mal2g1474 107 Gene3D Transcriptional Coactivator Pc4; Chain A 32 107 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1474 Mal-Chr2 17634470 17636498 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Mal2g1474 PC4 8.6e-24 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1474 K25815 - fve:101304416 137.887