Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1428 ATGGGTAGATCTCCTTGTTGTGAGAAAGAGCACACAAACAAAGGTGCTTGGACAAAAGAAGAAGATGAACGTCTCATTAACTACATCAAGCTTCATGGAGAAGGTTGTTGGAGGTCTCTTCCAAAAGCTGCTGGCTTGCTAAGATGTGGCAAGAGTTGCAGATTGAGATGGATAAATTACCTTAGACCTGATCTCAAGAGAGGAAACTTCACTGAACAAGAAGATGATCTTATCATTAACCTCCACAGCTTACTTGGAAACAAATGGTCACTAATTGCAGCTAGATTGCCGGGAAGAACAGATAATGAGATCAAGAACTACTGGAACACTCACATCAAGCGAAAACTCTACAGCCGTGGAGTCGACCCTCAAACCCATCGACCACTTAGCGACTCAACGGCATCCACCACCACAATTCCTCAAATCAACACTAGCAATAAGAACATGATCATCAATGGTATTAGCGTTATTAGCAGCAACATCAACAACAACAACAGTTTTCAGTTAGTGAGTGGCTATGCCAATACAAAGATTAATGGAACCAAGTTGGTCTGTGAAGATTCAAATTCAAATAGCAGTAGTGGCGTTAGCTCCGAAGAAACCTATCATCATCAACTCAATTTGGACCTTTCCATTGGTCTTCCGTCACAGCCACATCCTCAAATCAACACAGAAAATTTGAAATTAGAACAAAAACAAGGTGATGAGCAACAAGAAACAAAGGCTGTTACAAGTACTGGTGTGTGTTTGTGTTACAGTCTAGGGTTTCAAAGCAACCAAGTGTGTTGCTGCAACAAAGCCATAGGTAATAATAATATAACTACAACTGTCACCGATAATAGTATGTATAGATTTTACAGACCCATGAATATTTAG 876 0.4018 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEQEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGVDPQTHRPLSDSTASTTTIPQINTSNKNMIINGISVISSNINNNNSFQLVSGYANTKINGTKLVCEDSNSNSSSGVSSEETYHHQLNLDLSIGLPSQPHPQINTENLKLEQKQGDEQQETKAVTSTGVCLCYSLGFQSNQVCCCNKAIGNNNITTTVTDNSMYRFYRPMNI* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1428 291 MobiDBLite consensus disorder prediction 121 140 - -
Mal2g1428 291 CDD SANT 69 112 IPR001005 -
Mal2g1428 291 CDD SANT 16 61 IPR001005 -
Mal2g1428 291 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal2g1428 291 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal2g1428 291 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal2g1428 291 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mal2g1428 291 MobiDBLite consensus disorder prediction 125 140 - -
Mal2g1428 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal2g1428 291 Gene3D - 14 66 - -
Mal2g1428 291 PANTHER TRANSCRIPTION FACTOR MYB7 1 259 - -
Mal2g1428 291 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Mal2g1428 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal2g1428 291 SMART sant 13 63 IPR001005 -
Mal2g1428 291 SMART sant 66 114 IPR001005 -
Mal2g1428 291 Gene3D - 68 140 - -
Mal2g1428 291 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1428 Mal-Chr2 17105879 17107387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1428 1 224 MYB Transcription Factor Family AT2G16720 60.268 1.15e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal2g1428 Myb_DNA-binding 4.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1428 K09422 - gmx:100808083 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1428 2 17105879 17107387 Mal2g1428 2 17105879 17107387 ECH
Mal7g4816 7 116613045 116614484 Mal2g1428 2 17105879 17107387 PCT