Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1381 ATGGATAGAAGGAGAGAATCTTGGGAAGAAGAGGGAAAAGAAGACGAGAATTTGTTTCCGGTGTTTTCTGAAAGGTCGCAGCAAGATATGTCAGCCATAGTATCTGCTCTTACACAAGTCATGGGCGGCAATAACAATAATGAAATGCATGAAGCTTCCTCAATCCATAATATTGAACAATCTCAACCACCACAGCAAGATCAAGGCAATGTAAGAAGAAGACACTATAGAGGTGTGAGGCAGAGGCCATGGGGAAAGTGGGCTGCAGAGATTCGCGATCCGAAGAAGGCAGCAAGGGTATGGCTTGGAACCTTTGAAACTGCTGAGGCTGCAGCTGTTGCCTATGATGAAGCTGCACTCAGATTCAAAGGAAGCAAAGCTAAGCTCAATTTTCCTGAAAGGGTTCAAAGTACAGCAGAATTTGGATATAACCAAGAATATCATCACCTAGTGTCAACCACAAGTAACGACCAACAATCTAATCCAGTTCCTCATCCACACTTTTCTCAAGAAACATATCCAAATCCTTATCAATATGCTGCACAAGCACATCTTCAAGCTAGTGGCAGTAGCAACTTCAATCAGGATATGCTTCGTTTCTATGGGAGAGATATGTTTGTTTCTAATTCTCAGCCCTTATCAACTGCATCTTCATCTTCATCATCATCATCTTCTGGATTGTCTCAGCAGCAACAAGAGCTTCTGAGATTGTCGATGCAATATGGAGGTTCTTCTTCTTCCTCTTCTCAGCCTCCAAGGAATTGGAGGGATGACATGGATGGGAGACAATGA 792 0.4293 MDRRRESWEEEGKEDENLFPVFSERSQQDMSAIVSALTQVMGGNNNNEMHEASSIHNIEQSQPPQQDQGNVRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAVAYDEAALRFKGSKAKLNFPERVQSTAEFGYNQEYHHLVSTTSNDQQSNPVPHPHFSQETYPNPYQYAAQAHLQASGSSNFNQDMLRFYGRDMFVSNSQPLSTASSSSSSSSSGLSQQQQELLRLSMQYGGSSSSSSQPPRNWRDDMDGRQ* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1381 263 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Mal2g1381 263 PANTHER DNA-BINDING DOMAIN 23 244 IPR044808 GO:0003700|GO:0009873
Mal2g1381 263 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Mal2g1381 263 MobiDBLite consensus disorder prediction 1 20 - -
Mal2g1381 263 MobiDBLite consensus disorder prediction 152 173 - -
Mal2g1381 263 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Mal2g1381 263 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Mal2g1381 263 MobiDBLite consensus disorder prediction 211 254 - -
Mal2g1381 263 MobiDBLite consensus disorder prediction 57 77 - -
Mal2g1381 263 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Mal2g1381 263 MobiDBLite consensus disorder prediction 1 21 - -
Mal2g1381 263 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 244 - -
Mal2g1381 263 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Mal2g1381 263 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Mal2g1381 263 MobiDBLite consensus disorder prediction 211 263 - -
Mal2g1381 263 CDD AP2 75 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1381 Mal-Chr2 16585755 16587479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1381 17 200 AP2-EREBP Transcription Factor Family AT5G61890 55.385 2.29e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal2g1381 AP2 4.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1381 - - gmx:100787091 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1381 2 16585755 16587479 Mal2g1381 2 16585755 16587479 ECH