Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1377 ATGCCTTTTGAAATAATGAACCAGAGGGGTGGTGTTACTGCTTCATCTCATCTTTATGATGATGTTTCCTATGCTTCTGAGAGGAATGGTGGATCAAGGAAGCCAAAATCTATTCATGATGATTATCCACAAGGGAAGAGTGAAATTGCCGCTTCACCTGGAGGCATTTTGCATACTTCATCAATCCTTGAAAGAAATGCAAAAATAGGCTTGCCAATGTCACAGACTAGTTTATCTGGGGAAGTTTTAGAAAACCTACACTTTGGTGCACAAGCTGGCATGGTAGATGCGCTGAAGGATTCGAAGGAATCGTTGAATTATCATCCGAGATCATGGTCTGATGTGCACAGACAGCCAGCATCTAGCTCATATGGTTTAATTGGGAACAAGATTGTCACCAATGCAGGCGCACGTGAAAGCAGCCTATTCTCAAGCTCACTATCCGATATGTTTAGCCAAAAGTTGAGGATCTTGGGAAATGGTGTTCTGTCCGATCAGAATATCACTGCCGGTTCTCTTGCTGAGGAAGAACCATACAAATCTCTTGAAGAAATTGAGGCTGACACTATAGGGGATCTCCTTCCTGATGAAGATGATTTGTTTTCCGGTGTCACTGATGGTTTAGGAAGCAGTGCTCATGCTATAGCAAGTGATGATTTTGAAGATTTTGATTTGTTCAGCAGTGGTGGGGGCATGGAGTTGGAAGGAGATGAACTTCTAGTTTCAGGAAAAAGAATCAGTGGCTTGAATGGAGATCCTGCTTACTCTGAGGGTTTTAAAGGCAAAAGTCCTTTTGGTGAACAATCTTCTAGAACACTTTTTGTTGGAAACATTACTAGCGATGCAGAAGACTCGGAGCTAAAGGCTCTCTTTGAGCAATATGGAGATATCAGAACCCTGTATACTGCCGGCAAGCATCGTGGGTTTGTTATGATTTCTTACTATGACCTAAGGGCAGCACAAAATGCAATGAAAGCACTTCAAAATAGGTCATTGAATTCTAGGAAACTGGATATGCATTATTCAATTCCAAAGGGAAATGCTACAGAGAAGGATATTGGCCATGGTACACTGATGATATCTGGTCTTGATCCATCTGTTTTGAAAGACGAACTAAAACGTATTTTTGGATTTTATGGAGAAATCAAAGAGATCTATGAATATCCAGAAATGAATCATATCAAATATATTGAATTTTATGATGTTCGAGGTGCAGAAGCTTCTTTCCGTTCATTGAATGGGATCTGCATTGCTGGGAAGCACATCAAGCTTGAACCTGGCCATCCTAAGATTGCAACATGTATGACTCGGCCGACTCAAAAGAGACAGGGTGAACCTGATCTTGGTCATAATCTCAATGACATCTTATTCTTAAGACAGAAGGCTGGACTGTCTTCTGGAGTTATTGCATCTGGTGGAAGCTTAGAAAATGGATATAATCAAAGATTCCAATCTGCATCACAGCTGCCTTTGAATGCATTCTTTGATAACACAAATTTTCACGCGAATTCTAGTATTTCCAACACTGCAAGAGGGACATCTGCTGTAAAAGTATCCGGTGTTTGTGACTCCAGTAATGTTATTGATGCAATGAAATTTCCATCTATTCCAAGATTCCATCCTCATTCTTTGCCCGAGTATCGTGATGGTTTAGCTAATGGTAGTCCTTACAATTTGTCAAACACCATTAAAATGGCTGCCAATATTGGAACTGGATCCACAGAAGCATCTGATAGCAGGCATATTCAGGGAATGATCTCAACCGGGAACTTAGCAGATTTTAATGCAGGAGGAAATGGGAGCCTTCCCCATCATCAGCTTTATCATATGTGGAATGGCTCAAACTTGCGTCAGCAATCTCCATCAAATGCTGTGGTTTGGCAGAAAACACCATCTTTTGTTAATGGTGCTGGTTCTCCTGGTCTTCCTCAGATGCCTAGCTTTCCCAGGTCACCGGCTCATATGCTGAGAGCATCACATATAGACCACCATGTTGGATCAGCACCAGTAGTTACGGGATCACCCTGGGAAAGACAACATTCTTACTTGGGAGAGTCTCCTGATGCTCCTGGTTTTAGATTGGGTTCTCTAGGAAATACAGGTTTCCATGGTAGCTGGCAGTTGCATCCTCCAGATCTTTCCAGCAACATGTTTTCTCATATTGGTGGGAATGTTAACGATTTGACATCCAGTGTTGGGCAGGGCTCTCCTAAGCAGTTGTCACATGTCTTCCCTGGGAGACTTCCCATGACTTCAATGTCAAAATTTGACTCTACCAATGAACGAATGAGAAACTTCTATCATCGTAGAAGTGAAGCGAACAACAACAATGCGGATAAAAAGCAATTTGAACTCGACCTAGGCCGCATATCGCGTGGGGAAGACAACCGAACAACGCTGATGATAAAAAATATTCCCAACAAGTATACTTCAAAGATGCTTCTTACAGCCATAGATGAGAGTTGTCGTGGAACTTATGATTTTCTGTATTTGCCAATTGATTTCAAGAACAAATGTAATGTTGGCTATGCATTCATCAATATGATTGATCCTGGTCAAATAATTCCATTCCACCAGGCTTTTCATGGAAAAAAATGGGAGAAGTTTAACAGTGAAAAGGTAGCAGTACTTGCATATGCCCGAATTCAAGGAAAATCTGCTCTTATTGCTCATTTCCAGAATTCAAGCCTGATGAATGAAGATAAACGTTGCCGCCCTATTTTATTCCATACAGATGGTCCAAATGCTGGTGATCCGGAGCCTTTTCCCTTGGGTGCAAATATTAGAGTAAGGCCGGGAAAATTACGTAGTAGTGGCAACGAGGAGAGCCGCAGTCAAGGGAATTCTTCAACTTTGGCAAATGCAGAGGAGTTTGCTAGTGGAATCGATTCTTCACCGAGTTCTTCAAGAGACACTGACTGA 2922 0.4175 MPFEIMNQRGGVTASSHLYDDVSYASERNGGSRKPKSIHDDYPQGKSEIAASPGGILHTSSILERNAKIGLPMSQTSLSGEVLENLHFGAQAGMVDALKDSKESLNYHPRSWSDVHRQPASSSYGLIGNKIVTNAGARESSLFSSSLSDMFSQKLRILGNGVLSDQNITAGSLAEEEPYKSLEEIEADTIGDLLPDEDDLFSGVTDGLGSSAHAIASDDFEDFDLFSSGGGMELEGDELLVSGKRISGLNGDPAYSEGFKGKSPFGEQSSRTLFVGNITSDAEDSELKALFEQYGDIRTLYTAGKHRGFVMISYYDLRAAQNAMKALQNRSLNSRKLDMHYSIPKGNATEKDIGHGTLMISGLDPSVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASFRSLNGICIAGKHIKLEPGHPKIATCMTRPTQKRQGEPDLGHNLNDILFLRQKAGLSSGVIASGGSLENGYNQRFQSASQLPLNAFFDNTNFHANSSISNTARGTSAVKVSGVCDSSNVIDAMKFPSIPRFHPHSLPEYRDGLANGSPYNLSNTIKMAANIGTGSTEASDSRHIQGMISTGNLADFNAGGNGSLPHHQLYHMWNGSNLRQQSPSNAVVWQKTPSFVNGAGSPGLPQMPSFPRSPAHMLRASHIDHHVGSAPVVTGSPWERQHSYLGESPDAPGFRLGSLGNTGFHGSWQLHPPDLSSNMFSHIGGNVNDLTSSVGQGSPKQLSHVFPGRLPMTSMSKFDSTNERMRNFYHRRSEANNNNADKKQFELDLGRISRGEDNRTTLMIKNIPNKYTSKMLLTAIDESCRGTYDFLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPLGANIRVRPGKLRSSGNEESRSQGNSSTLANAEEFASGIDSSPSSSRDTD* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1377 973 MobiDBLite consensus disorder prediction 908 973 - -
Mal2g1377 973 Gene3D - 252 352 IPR012677 -
Mal2g1377 973 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 271 344 IPR000504 GO:0003723
Mal2g1377 973 MobiDBLite consensus disorder prediction 939 973 - -
Mal2g1377 973 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 358 423 IPR000504 GO:0003723
Mal2g1377 973 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 273 337 IPR000504 GO:0003723
Mal2g1377 973 CDD RRM3_MEI2_like 800 885 IPR034454 -
Mal2g1377 973 Gene3D - 353 447 IPR012677 -
Mal2g1377 973 PANTHER RNA RECOGNITION MOTIF 2, NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 2 973 - -
Mal2g1377 973 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 356 429 IPR000504 GO:0003723
Mal2g1377 973 CDD RRM1_MEI2_like 270 345 IPR034453 -
Mal2g1377 973 Pfam RNA recognition motif 2 797 893 IPR007201 -
Mal2g1377 973 PANTHER RNA RECOGNITION MOTIF-CONTAINING 2 973 - -
Mal2g1377 973 SUPERFAMILY RNA-binding domain, RBD 799 884 IPR035979 GO:0003676
Mal2g1377 973 SUPERFAMILY RNA-binding domain, RBD 268 428 IPR035979 GO:0003676
Mal2g1377 973 SMART rrm1_1 799 877 IPR000504 GO:0003723
Mal2g1377 973 SMART rrm1_1 357 425 IPR000504 GO:0003723
Mal2g1377 973 SMART rrm1_1 272 340 IPR000504 GO:0003723
Mal2g1377 973 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1377 Mal-Chr2 16556570 16562980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1377 266 446 Eukaryotic Initiation Factors Gene Family AT3G16380 24.752 2.99e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1377 - - gmx:100797616 1488.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4841 7 116873497 116879712 Mal2g1377 2 16556570 16562980 ECH
Mal2g1377 2 16556570 16562980 Mal2g1377 2 16556570 16562980 ECH
Mal7g4841 7 116873497 116879712 Mal2g1377 2 16556570 16562980 PCT