Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1373 ATGATGTCCAGAATGAACAACAACAATGGTTGGATGGAAGAAAAAGAAGACGAAAACAACACTACAAACCCAAACACTCCTTCATCAGCTTCACCTGCTTTCATCCATAACAGACACCAAGATTTCTCTTCTTTCATCAAACCCATGCTTGGTGAAATCGATGATGAAGATGAACAATGGTACATCAGAGACATGTCTTTTTCTTCTTCCCCTAATTTAGACAACGTTTTACTTCACACCGTTAACGATTCCGTTTCTTCTTCATGTTCACCTTCTTCCACCATTTTCAACACCCTTGTTGATCCTTCACCATCCAATCATCATCTTCAGTATTTTCTTCCTCCTCAAAATCCCAAACCCATTACCACCGTTTCTTCACTACTCAACAACCCTTTTGAGCTTCCTTGTGAAGTTGGTTTTCTTGATCATCAAGCTTCAACTTTACCATCATTACCCTCTTCTTCATTTCTGGGTAGTTTTGTTGATTTTGCTACCAAAACGCCATTAACAGCTACTACTACTACTACTACACAGATGAGCTTGCCCCATTTACCTCAAATCAACAATGCCTTCATGGGGTTTCAGAATTTGGAAGAGGGTTCTGGAAAATCACTGTTTTTGAGACCACTTGACTCTTTGCCTTCTTCTGGAACACAACCAACTCTGTTTCAGAAAAGAGCAGCACTGAGAAAAAACATGGGCAAGGGTGAGATTGGTGAAGGGATTGATAAGAAAAGGAAGTTCAGTGGTGGAGATGAAATTGATGATTTGAGTTTTGATGGGTCTGGTTTGAACTATGATTCTGATGATTTGACTGAGAGTAAGATGGAAGAGAGTAATGGAAAAAATATTGGAAATGGTTCTAATGGTAACAGTACTGTCACTGATCAGAAAGGGAAGAAGAAAGGAATGCCTGCTAAGAATTTGATGGCCGAACGTCGCCGGAGGAAGAAGCTCAATGATAGACTCTATATGCTGCGGTCCGTTGTTCCAAAGATTAGCAAAATGGATAGGGCTTCAATTCTTGGGGATGCAATTGAGTATCTGAAGGAACTTCTGCAAAGGATCAATGACCTTCATAATGAGTTGGAATCAACACCTGCTGGATCTTCACTAACACCTGCTTCAAGCTTCCATCCTTTGACACCGACTCCATCTTCGTTGTCGGGCCGTATCAAAGAAGAACTATGCCACAGCTCATTGCCAAGCCCCAATGGCCAACCTGCTAGGGTTGAGGTTCGGTTGCGGGAAGGAAGGGCCGTAAATATCCACATGTTTTGCGCCCGCAAACCTGGTCTGTTGCTCTCAACCATGAGGGCTTTGGATAACCTTGGATTAGACATTCAGCAAGCTGTTATAAGCTGTTTCAATGGATTTGCTATGGATATTTTCAGAGCCGAGCAATGCAAAGAAGGTCAAGATGTTCATCCAGAGCAAATCAAAGCAGTACTCTTGGATTCAGCTGGCTTCAATGGCATGATCTAA 1485 0.4202 MMSRMNNNNGWMEEKEDENNTTNPNTPSSASPAFIHNRHQDFSSFIKPMLGEIDDEDEQWYIRDMSFSSSPNLDNVLLHTVNDSVSSSCSPSSTIFNTLVDPSPSNHHLQYFLPPQNPKPITTVSSLLNNPFELPCEVGFLDHQASTLPSLPSSSFLGSFVDFATKTPLTATTTTTTQMSLPHLPQINNAFMGFQNLEEGSGKSLFLRPLDSLPSSGTQPTLFQKRAALRKNMGKGEIGEGIDKKRKFSGGDEIDDLSFDGSGLNYDSDDLTESKMEESNGKNIGNGSNGNSTVTDQKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPAGSSLTPASSFHPLTPTPSSLSGRIKEELCHSSLPSPNGQPARVEVRLREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAVLLDSAGFNGMI* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1373 494 MobiDBLite consensus disorder prediction 364 389 - -
Mal2g1373 494 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 98 494 - -
Mal2g1373 494 CDD ACT_UUR-ACR-like 423 483 - -
Mal2g1373 494 Pfam Helix-loop-helix DNA-binding domain 310 352 IPR011598 GO:0046983
Mal2g1373 494 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 303 352 IPR011598 GO:0046983
Mal2g1373 494 Gene3D - 295 367 IPR036638 GO:0046983
Mal2g1373 494 CDD bHLH_AtAMS_like 306 371 - -
Mal2g1373 494 MobiDBLite consensus disorder prediction 278 298 - -
Mal2g1373 494 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 306 370 IPR036638 GO:0046983
Mal2g1373 494 Coils Coil 342 366 - -
Mal2g1373 494 PANTHER BHLH TRANSCRIPTIONAL FACTOR 98 494 - -
Mal2g1373 494 SMART finulus 309 358 IPR011598 GO:0046983
Mal2g1373 494 MobiDBLite consensus disorder prediction 268 306 - -
Mal2g1373 494 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1373 Mal-Chr2 16507901 16510421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1373 100 467 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 55.297 1.46e-115 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g1373 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1373 - - vra:106778861 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1373 2 16507901 16510421 Mal2g1373 2 16507901 16510421 ECH