Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1365 ATGGCTGCTTTTTCATATCAATACCATCCTTTCCTTGTTGACTCATCATTCATGCTCAACATCAACACTGCTTCTCCTCCTCCTCCTTCACAGTTTCACCCTCTTCATCAAGATATTATTAACTGTGTTGATCAACAAAGCTCCAAAATTACTACTATAACTGACAATGAACCTTCTTCTCTCACCAAAAACCTTAGTCCTCAATCCTCCATGGTTTTGGACAAGCTTGAAAATGGTGATGAGCAAGTTACTCAGAGAATTAGTCCTACGGAGAAGAAGAGGAGAACCAGAAACAATGGACCTTCCTCTACTAACCCTCAATCTCATGATAATGCAGCAGAACCAGAAGGGAGAAAGAAGAAACAGAAGAAAAACAAAGAAGATGAGAGAAAGTGTTTGGATGAGCCCCCAACTGGGTATATCCACGTCAGAGCAAGAAGGGGTCAGGCCACTGATAGCCACAGCCTTGCTGAAAGGGTAAGAAGAGAGAAAATAAGTGAAAGGATGAAGAAGTTGCAGCAACTTGTGCCAGGCTGTGATAAGGTCACTGGAAAGGCCCTTATGTTAGATGAAATAATCAATTATGTTCAGTCTTTACAGAATCAAGTAGAGTTCTTGTCAATGAAACTTACTTCTGTGAATCCTATGTTCTATGACATGGCAACAGACCTAGACACTCTTTTGGTTAGACAAGAGAAATTAAATAACTTGGCATCACCATCAACATTATCATCTGTGTCACATTGCAATAGTCCTAAACAAGGCACAACTTTTGGTGATACAACAACCATGACTCCAACCAACATCTTCCAAACTGCTAATAATGACTACCTTTTGGATACTTCAGCTTCAATTTTTCTTCAAGGACAGAGGTCATCAAATGTTGTCTCTGAGGATGCTAGTCATTTTTGGGAGGTAGAAGATCAGAGACAAAAGTTTCTTCATTCACATGGATTCAACAACAACTTATGTTCCTTTCATTAA 984 0.3953 MAAFSYQYHPFLVDSSFMLNINTASPPPPSQFHPLHQDIINCVDQQSSKITTITDNEPSSLTKNLSPQSSMVLDKLENGDEQVTQRISPTEKKRRTRNNGPSSTNPQSHDNAAEPEGRKKKQKKNKEDERKCLDEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKKLQQLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSVNPMFYDMATDLDTLLVRQEKLNNLASPSTLSSVSHCNSPKQGTTFGDTTTMTPTNIFQTANNDYLLDTSASIFLQGQRSSNVVSEDASHFWEVEDQRQKFLHSHGFNNNLCSFH* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1365 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 216 IPR036638 GO:0046983
Mal2g1365 327 SMART finulus 155 205 IPR011598 GO:0046983
Mal2g1365 327 MobiDBLite consensus disorder prediction 73 157 - -
Mal2g1365 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 199 IPR011598 GO:0046983
Mal2g1365 327 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 327 IPR024097 GO:0006355
Mal2g1365 327 MobiDBLite consensus disorder prediction 241 263 - -
Mal2g1365 327 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 327 - -
Mal2g1365 327 Pfam Helix-loop-helix DNA-binding domain 153 200 IPR011598 GO:0046983
Mal2g1365 327 CDD bHLH_AtBPE_like 139 224 - -
Mal2g1365 327 MobiDBLite consensus disorder prediction 112 157 - -
Mal2g1365 327 Gene3D - 146 219 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1365 Mal-Chr2 16404824 16406566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1365 74 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 50.000 2.41e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g1365 HLH 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1365 - - gmx:100806696 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1365 2 16404824 16406566 Mal2g1365 2 16404824 16406566 ECH