Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1339 ATGGAGTGGAATTTGAAAGCATCTTCTTGGGATTTGGGGGGTATAGAAGAGGCAACATTACCAAACATAGAAACAATGGAAGAATCAAACAGATTTGGAGTTTATAAAATGAAAGGGGAGTTTTCTGTTGATTTGAAGCTTGGTCAGGTTGAAAATTCTGCCACTGATCAATCACAACTTCCTTTGTCCAAAGATGCCTCCAAAATGGCATCACCTACTTCTTCAGGATCTTCTAAGAGAGCTAGAGCTATTAATAATACAACATTGAGTGTTTCTTGTCTTGTGGATGGGTGCAATTCTGATCTTAGTAATTGTAGAGATTATCATAGGCGTCATAAGGTTTGTGAACTTCATTCCAAGACTCCTGAGGTTACAATTTGTGGTCTTAAGCAAAGATTCTGCCAACAGTGTAGCAGGTTTCATTCGCTGGAGCAATTTGATGAAAGAAAAAGAAGCTGTAGGAAACGTTTAGATGGACACAACCGAAGGAGAAGAAAACCACAGCCTGAACCTATCACGCGACCTGCTGGTAGTTTTTTGTCCAATTACCAAGGCACCCAGTTGCTACCCTTTTCAAGTTCTACTACCATGGTGAATTCAGCTTGGAGTAGCGGACTTATTACTTCCTGTGAAAGTGGTAGGCTTCACATCCACAACCAAAATCATCAAGTGCATGTGGCTGATAAACAAGTCCTTTTCCTTGGTTCTACTACAACCACCTACGAACCAGGGAAACAACTTAAATTCCTACATAATGACAACAACAATCCCTCACTTCATAACCAAAACACACCTCTTCTCAGGACAAGTAGCAAAATGTTCTGTGATAGCTTAACAGCTTCTTCAATAAACGACTCTCCTTGTGCTCTCTCTCTTCTGTCATCATCACAGACATACACACCTGAGAATGGTTTGAATCAAATGCTGCAGCAGCCTCATTCAATGTCCCTTATGCAGCCCTTAGGATTGAGCCTGCATGGTAGCAACAACAGCTTTGAGTCTTTGGATAGAGTGTTGGTCCCTAATGGAAATGAGAGTGATCATTGCTCCTCATTGTATAACATGGGTTCTGATGGATCCCAAGGCAATGATGCACCTCAACTATTTCCCTATCAATGGGAATAG 1125 0.4124 MEWNLKASSWDLGGIEEATLPNIETMEESNRFGVYKMKGEFSVDLKLGQVENSATDQSQLPLSKDASKMASPTSSGSSKRARAINNTTLSVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPEVTICGLKQRFCQQCSRFHSLEQFDERKRSCRKRLDGHNRRRRKPQPEPITRPAGSFLSNYQGTQLLPFSSSTTMVNSAWSSGLITSCESGRLHIHNQNHQVHVADKQVLFLGSTTTTYEPGKQLKFLHNDNNNPSLHNQNTPLLRTSSKMFCDSLTASSINDSPCALSLLSSSQTYTPENGLNQMLQQPHSMSLMQPLGLSLHGSNNSFESLDRVLVPNGNESDHCSSLYNMGSDGSQGNDAPQLFPYQWE* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1339 374 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1 7 374 - -
Mal2g1339 374 ProSiteProfiles Zinc finger SBP-type profile. 90 167 IPR004333 GO:0003677
Mal2g1339 374 Gene3D - 84 154 IPR036893 GO:0003677|GO:0005634
Mal2g1339 374 MobiDBLite consensus disorder prediction 155 179 - -
Mal2g1339 374 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 7 374 IPR044817 GO:0003677
Mal2g1339 374 MobiDBLite consensus disorder prediction 54 81 - -
Mal2g1339 374 SUPERFAMILY SBT domain 91 172 IPR036893 GO:0003677|GO:0005634
Mal2g1339 374 Pfam SBP domain 93 166 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1339 Mal-Chr2 16099106 16102480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1339 1 374 SBP-box Gene Family AT5G50670 42.394 1.79e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal2g1339 SBP 5.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1339 - - gmx:100787407 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4885 7 117432779 117436633 Mal2g1339 2 16099106 16102480 PCT