Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1329 ATGGAGAACAACAACAACAACAACCACCAACAACAATATCCAACACCTTCACCCACGGCGGTTACACCACCACCATTTCAACACCTTCTCCAACAACAACAACAACAGCTTCAAATGTTCTGGTCCTACCAACGCCAAGAAATCGAACACGTCAACGACTTCAAAAACCATCAACTTCCATTAGCACGCATTAAGAAAATTATGAAAGCCGATGAAGACGTTCGCATGATTTCCGCTGAAGCACCAATTCTCTTCGCGAAAGCTTGTGAGCTTTTCATTCTCGAACTCACCATTCGTTCTTGGCTTCATGCTGAAGAGAATAAACGACGAACTCTTCAGAAAAACGACATTGCTGCTGCTATAACGCGCACTGATATTTTTGATTTTTTGGTTGATATTGTACCGAGAGATGAGATTAAAGATGAAGGTGCTGCTGGCATTGTTGGTGGTGCTGCTAGTGGTGTTCCTTATTACTATCCTCCTATGGGACAACCTGCTGGAATGATGATTGGTCGTCCGGCTGTTGATCCGGCGACCGGTGTTTATGTTCAGCCGCCTTCTCAGGCTTGGCAGTCTGTATGGCAGACTGGTGGTGATGATGGTTCTTATGCTGCTGCTGCTGGTGGCGGTGGTCAGCACAATGTCGATGGCCAGAGCTGA 660 0.4636 MENNNNNNHQQQYPTPSPTAVTPPPFQHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEGAAGIVGGAASGVPYYYPPMGQPAGMMIGRPAVDPATGVYVQPPSQAWQSVWQTGGDDGSYAAAAGGGGQHNVDGQS* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1329 219 MobiDBLite consensus disorder prediction 1 25 - -
Mal2g1329 219 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 219 - -
Mal2g1329 219 Pfam Core histone H2A/H2B/H3/H4 5 121 IPR007125 GO:0003677
Mal2g1329 219 MobiDBLite consensus disorder prediction 1 16 - -
Mal2g1329 219 Gene3D Histone, subunit A 25 136 IPR009072 GO:0046982
Mal2g1329 219 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 1 219 - -
Mal2g1329 219 SUPERFAMILY Histone-fold 14 130 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1329 Mal-Chr2 16032783 16035664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1329 14 200 CCAAT-HAP5 Transcription Factor Family AT5G63470 77.103 3.79e-103 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mal2g1329 Histone 1e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1329 - - gmx:100818447 334.724