Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1318 ATGCCGATCATCAGAAGCGTTACAAGGGAATATATTGGCAAGCCAATAAGATGCAAAGCTGCAATATGCAGAAAATCAGGTGAACCTCTTGTTATAGAGGAAGTTGAGTTAGACCCACCTAAAACATGGGAAGTACGGATCAAAATTTTATGCACATCTCTCTGCCACTCTGATGTCACCTTTTGGAAAATGGATTCTTCAGCACCTGCTGCTATGTTTCCAAGAATATTTGGACACGAAGCTGTGGGAGTTGTGGAGAGTGTAGGGGAGAATGTGGAAGAAGTGAAAGAGGGTGACTTAGTGGTGCCAGTGTTCCTCACAAACTGTGGTGAATGCAGAGACTGTGAGAGCACAAAGAGCAACAATTGCACAAAGTTTAACAAACCGATCCGTGACATGCCAAGAGATGGAACAAGCAGGTTTAGGGACATGAATGGAGAAGTGTTGCACCATTTTTTTGGTGTCAGTAGCTTTTCTGAGTATACAGTGGTGGATGTAACTCATTTGGTTAAAATTAGTCATGATCTTCCTCTTGATAAGGCTTGCTTGCTCAGTTGCGGTGTTTCCACAGGGGTAGGGGCAGCGTGGAAGGTAGCTGATGTAGAAAAAGGGTCCACAGTCGCTATTTTTGGGCTTGGTGCTGTAGGCCTGGCTGTTGCTGTAGCAGCAAAGCAACGAGGAGCTTCAAAGATTATAGGTGTTGATCTAAATCAGGACAAATTTGAAATAGGAAAACGATTTGGAATAACTGATTTTGTGAATCCCTCCACTTGCAACGAGAAATCTGTAAGCGAGGTGATTAAGGATATGACAAATGGAGGAGCTGATTATTGCTTTGAGTGCATAGGCTTGGCATCACTAATGGCAGAGGCTTTTAATAGCAGCCGAGAAGGTTGGGGTAAAACAGTGATAATAGGCGTGGAAATGCACGGTTCGCCACTGACTTTAAGTCCTTATCACATTCTAAGTGGCAAAACTATCACTGGATCACTATTTGGAGGCTTGAAACCAAAATCTGATCTTCCCCTCCTTGCTCAGAAGTACTTAGACAAAGAACTTAACTTGGATGGCTTTATATCACAAGAGGTGGACTTAAAGGACATTAACAAAGCTTTTGACTATCTTCTGCAAGGAAAGAGTATCCGTTGCATTATAAGGATGGGTCATTAA 1170 0.4274 MPIIRSVTREYIGKPIRCKAAICRKSGEPLVIEEVELDPPKTWEVRIKILCTSLCHSDVTFWKMDSSAPAAMFPRIFGHEAVGVVESVGENVEEVKEGDLVVPVFLTNCGECRDCESTKSNNCTKFNKPIRDMPRDGTSRFRDMNGEVLHHFFGVSSFSEYTVVDVTHLVKISHDLPLDKACLLSCGVSTGVGAAWKVADVEKGSTVAIFGLGAVGLAVAVAAKQRGASKIIGVDLNQDKFEIGKRFGITDFVNPSTCNEKSVSEVIKDMTNGGADYCFECIGLASLMAEAFNSSREGWGKTVIIGVEMHGSPLTLSPYHILSGKTITGSLFGGLKPKSDLPLLAQKYLDKELNLDGFISQEVDLKDINKAFDYLLQGKSIRCIIRMGH* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1318 389 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Mal2g1318 389 Gene3D - 22 383 - -
Mal2g1318 389 Pfam Alcohol dehydrogenase GroES-like domain 44 172 IPR013154 -
Mal2g1318 389 Gene3D - 191 330 - -
Mal2g1318 389 PANTHER ALCOHOL DEHYDROGENASE 9 387 - -
Mal2g1318 389 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 9 387 - -
Mal2g1318 389 Pfam Zinc-binding dehydrogenase 214 337 IPR013149 -
Mal2g1318 389 SUPERFAMILY GroES-like 338 386 IPR011032 -
Mal2g1318 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 176 350 IPR036291 -
Mal2g1318 389 SUPERFAMILY GroES-like 13 196 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1318 Mal-Chr2 15842943 15850568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1318 44 274 Monolignol Biosynthesis Gene Families AT4G37970 27.559 1.01e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1318 K00121 - mnt:21395940 575.859