Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1311 ATGGCGCTATTACGTACTACTATTCCATGTTTAACTTCTCCAACTCAGTTATCCACAAACTCTTTCGAGTTTGAGAAGAAAAGTTATTCCCTTAATCCCTTGTTTTCTTCTTCGTTTCACTCTCCTCTTCGTCTATCCATTACCCATACCTCAACCCTTATTTTCAGAATCAAACAACACTCTAATTCTACTCTCAGATTCTCCTCCGAACAACAACAAACCCAAGTAGTAACCGAGGAAGAATTGTCTACTACTAGGTTGCTTGTTCAGAATGTTCCATGGACAAGTACCACCGAAGATATTCGTTCTTTGTTTGAAAAACATGGCAAAGTCCTCGATGTTGAGCTTTCTATGTTCAATAAGTACAGAAACAGGGGTTTAGCGTTTGTGGAAATGGGTTCCCCCGAAGAAGCTTCTGCGGCTCTCAATAGTCTCGAATCGTATGAGTTTGACGGTCGTGTAATAAATATCAAATGTGCTCGGCCTAAAAAGGAGAAAACACCGCCGCCACCAGTGGAACGCAAGCCAATAACATACAACTTGTTTATTGCAAACTTTCCCTATGAAGCAAGGTCTAAAGATCTGAAGGAGTTTTTTGATTCAGGAACTGGTAAAGTTGTTTCTGCTGAGGTTATTTTTCATGAAAATCCTAGACGGCCAGCTGGTTATGGATTTGTGTCCTTCAAGTCAAAAAAAGAAGCTGATGATGCTCTTTCCCAGTTTCAAGGAAAGAATTTTATGGGAAGGCCACTAAGGGTGGCACCAAGTAAACGGTTTGTTAAACTGGCAGAGGAGAGTGCAGGGTCCGAAGATACATCTTCTGAGTTGAGCGTCAATGAGGCAGAAGCCGACAAAGCTGATTGA 864 0.4155 MALLRTTIPCLTSPTQLSTNSFEFEKKSYSLNPLFSSSFHSPLRLSITHTSTLIFRIKQHSNSTLRFSSEQQQTQVVTEEELSTTRLLVQNVPWTSTTEDIRSLFEKHGKVLDVELSMFNKYRNRGLAFVEMGSPEEASAALNSLESYEFDGRVINIKCARPKKEKTPPPPVERKPITYNLFIANFPYEARSKDLKEFFDSGTGKVVSAEVIFHENPRRPAGYGFVSFKSKKEADDALSQFQGKNFMGRPLRVAPSKRFVKLAEESAGSEDTSSELSVNEAEADKAD* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1311 287 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 87 155 IPR000504 GO:0003723
Mal2g1311 287 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 181 252 IPR000504 GO:0003723
Mal2g1311 287 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 85 162 IPR000504 GO:0003723
Mal2g1311 287 PANTHER OS08G0483200 PROTEIN 1 286 - -
Mal2g1311 287 Gene3D - 56 166 IPR012677 -
Mal2g1311 287 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 179 258 IPR000504 GO:0003723
Mal2g1311 287 SUPERFAMILY RNA-binding domain, RBD 71 169 IPR035979 GO:0003676
Mal2g1311 287 MobiDBLite consensus disorder prediction 263 287 - -
Mal2g1311 287 Gene3D - 167 269 IPR012677 -
Mal2g1311 287 PANTHER RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN 1 286 - -
Mal2g1311 287 SUPERFAMILY RNA-binding domain, RBD 168 259 IPR035979 GO:0003676
Mal2g1311 287 SMART rrm1_1 180 254 IPR000504 GO:0003723
Mal2g1311 287 SMART rrm1_1 86 158 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1311 Mal-Chr2 15772710 15774274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1311 84 258 Eukaryotic Initiation Factors Gene Family AT3G16380 28.415 3.46e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1311 - - gmx:100790439 317.39