Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1309 ATGGCACTTGAAACTGTGGTTTTCCCACAACAAGATCCATTCACATATAGTTACAAGGACAATTATTATTTCAACTCTTTGAGCAATGACTACGATCTTCATGCGGAAGAACAAGAGAATGTTCTCCTAGGAATCATCAACAACAACAACAACAACAACAACAACGTAGAACAACAACAAAATCTCCATGCAAATTGGGATTCTTGTTCAATCAAAGACCAATGGGAATATTCACACTCTTCTTCTCCTGAAGCTTGCACCGTTGATCAAACTCTCACGGTACCTTTGCCTCCTTCTTCTTCTTCCCCTGTGGAAGCTACAACCACCGCCACGTGTCGGCGAAAACGGCGTCGTATCAAGAGTGCAAAGAACAAAGAGGAAATTGAAAATCAGAGGATGACTCATATTACTGTTGAACGCAATCGAAGAAAACAAATGAATGAGTACTTGAATGTGCTTCGATCTTTGATGCCTTCTTCTTATGTTCAAAGGGGTGACCAAGCTTCTATTATTGGAGGTGCAATAAACTTTGTGAAGGAGTTAGAACATCTTTTACAGTCCATGGGGGGCCAAAACAAAACGAAACAACCGAACGAGAACATAGGCTTAAATAATGGACCACCTTTAGCTGAATTCTTCACTTTTCCTCAGTACACAACAAGTGCAAATCAGAACAACAACAACAACACGGTCTCAATGGAACACAATTACCACGAACAGAAAAAATGGTCCGTGGCAGACATTGAAGTCACAATGGTAGATAGTCATGCCAACATGAAAATTTTGTCCAAGAAAAAAACAGGACAACTCATGAAGATTGTTGTTGGGTTACAAAATCTTAGGCTAAGCATTCTTCATCTTAATGTTACTACTATTGATGATATGGTACTTTACTCAGTTAGTGTCAAGGTAGAGGAGGGGAGTCAGCTGAATAGTGTGGATGAAATTGCGGCTGCTGTGAATCAACTATTAAGGACGGTCCAACAAGAACTGGTTTATCAACTAAATTGA 1011 0.3976 MALETVVFPQQDPFTYSYKDNYYFNSLSNDYDLHAEEQENVLLGIINNNNNNNNNVEQQQNLHANWDSCSIKDQWEYSHSSSPEACTVDQTLTVPLPPSSSSPVEATTTATCRRKRRRIKSAKNKEEIENQRMTHITVERNRRKQMNEYLNVLRSLMPSSYVQRGDQASIIGGAINFVKELEHLLQSMGGQNKTKQPNENIGLNNGPPLAEFFTFPQYTTSANQNNNNNTVSMEHNYHEQKKWSVADIEVTMVDSHANMKILSKKKTGQLMKIVVGLQNLRLSILHLNVTTIDDMVLYSVSVKVEEGSQLNSVDEIAAAVNQLLRTVQQELVYQLN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1309 336 SMART finulus 136 187 IPR011598 GO:0046983
Mal2g1309 336 CDD bHLH_AtFAMA_like 133 200 - -
Mal2g1309 336 ProSiteProfiles ACT domain profile. 258 334 IPR002912 -
Mal2g1309 336 Gene3D - 120 198 IPR036638 GO:0046983
Mal2g1309 336 PANTHER MAX DIMERIZATION, MAD 1 332 - -
Mal2g1309 336 MobiDBLite consensus disorder prediction 94 109 - -
Mal2g1309 336 Pfam Helix-loop-helix DNA-binding domain 131 182 IPR011598 GO:0046983
Mal2g1309 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 181 IPR011598 GO:0046983
Mal2g1309 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 195 IPR036638 GO:0046983
Mal2g1309 336 MobiDBLite consensus disorder prediction 94 123 - -
Mal2g1309 336 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1309 Mal-Chr2 15752859 15755345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1309 1 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 46.584 3.68e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g1309 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1309 - - gmx:100805420 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1309 2 15752859 15755345 Mal2g1309 2 15752859 15755345 ECH