Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1308 ATGAACACTTTTCCACTCAAATTTCACTTCAATTCCAATCATGCCCTTCCCTACCTCCTCCTCTTCATCATCCTTTTCACACCGCTTCCATCGCCGGCAACGGCACAGAATCCGAATACGTTACCACCACCACCACCAGACAAAATTTCCACGCTCAAATTCGACAAATCCATGGCAATCGTACTAATCATCTTAATTGCCGTCTTTCTCATCCTTGGTTTCCTCTCCGTCTACACTCGCCAGTGTGCTGAACAACGAATGAGAGGAAGATTCGACTTATCTATTCCGATCGCCGGCAGTCACCGGAGACACCGTGGACTTGAAACTGAAATTATCGAAACGTTTCCCACTTTCGTTTACTCCACCGTGAAAGGACTCAAAATTGGAAGAGCAACGCTAGAATGCGCCGTGTGCTTAAACGAGTTCCAAGACGATGAAACGCTACGTTTGATTCCGAATTGTAACCATGTTTTTCATTCTCAATGTGTTGATGCTTGGCTTGTTAATCACTCCACGTGTCCCGTTTGTCGGGCCAATTTGATTCCAAAACCTGGTGACACTTCTTTCGCTTCAATTCAGATTCAGATTCCGGATTTATCCGATTCAGATGACCCGACCCGAAACAGTCCTAATAGAACTATGGCTACACTTACGTCTCGTTCTCCTTCTCCTTCTCCTAAGGTGGATAATTATTCAGTTACACCGAACCGGGCTCAACCGGTTCGTTCAAATTCAACGGGGTTTAAAATTGGGAACTGGGTTCCGTTTCCACGGTCACATTCAACAGGTCATTCACTGGTTCAAGAAGGGGAGAATCACGAGCGGTTCACTTTGAGATTACCGGAGGAAGTGAGGAACCGGTTGGTGGGTTCAACGCCGAGTCGGTTGACGAGTTGTGGTGTTACATTTACTCGAGAGGGTAGTGGGAGGAGGGGTTACAGAACGAGAAGTGTGGGAAGTAGTGGTAATGCGAGGAGCTATGATTGGTTTAACCGGCCGGACCGGAGGGGATTCTCTTGGACGCCACCGTTTATGGGTCGAACCGGTTCGAGTTGGTTGAAGAATAAGTCACCTGGGAAATTGGATGACGTAGGAGAACGGGATCGTTTGTTTGAAGGTAATCGGGGTTAG 1131 0.4739 MNTFPLKFHFNSNHALPYLLLFIILFTPLPSPATAQNPNTLPPPPPDKISTLKFDKSMAIVLIILIAVFLILGFLSVYTRQCAEQRMRGRFDLSIPIAGSHRRHRGLETEIIETFPTFVYSTVKGLKIGRATLECAVCLNEFQDDETLRLIPNCNHVFHSQCVDAWLVNHSTCPVCRANLIPKPGDTSFASIQIQIPDLSDSDDPTRNSPNRTMATLTSRSPSPSPKVDNYSVTPNRAQPVRSNSTGFKIGNWVPFPRSHSTGHSLVQEGENHERFTLRLPEEVRNRLVGSTPSRLTSCGVTFTREGSGRRGYRTRSVGSSGNARSYDWFNRPDRRGFSWTPPFMGRTGSSWLKNKSPGKLDDVGERDRLFEGNRG* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1308 376 MobiDBLite consensus disorder prediction 359 376 - -
Mal2g1308 376 CDD RING-H2_PA-TM-RING 134 177 - -
Mal2g1308 376 MobiDBLite consensus disorder prediction 197 246 - -
Mal2g1308 376 ProSiteProfiles Zinc finger RING-type profile. 135 177 IPR001841 -
Mal2g1308 376 PANTHER RING FINGER DOMAIN-CONTAINING 19 305 - -
Mal2g1308 376 SMART ring_2 135 176 IPR001841 -
Mal2g1308 376 MobiDBLite consensus disorder prediction 341 376 - -
Mal2g1308 376 SUPERFAMILY RING/U-box 134 187 - -
Mal2g1308 376 Pfam Ring finger domain 134 177 IPR001841 -
Mal2g1308 376 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 182 IPR013083 -
Mal2g1308 376 PANTHER RING-H2 FINGER PROTEIN ATL11 19 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1308 Mal-Chr2 15735304 15736434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1308 9 348 Rapid Response to Elicitors AT3G05200 37.607 2.14e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1308 K10664 - gmx:100805815 353.214