Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1298 ATGAGGAAGAAAAGAAAAGGAAGTGAGACTGATGATTTGACGGATCTGGGTGGTGGTACTGTTTTGCCATTGGATCATGGTTCCGTTGGATCGTCGAATTTGAAGTCTCATTACTCGTTGGAAGATTGTTGTAGGTTGAAGAAAAGGTGTAAAGAAGATGTTGACACTGGCGCTGAGCCTGCTGCTGGTTCATTTAAGAGTAGGCTAGCTGGCATTGCGACTGCGCCGCCTTTTGGGACGTCGTCTTTGATTACTCCAACTAGAGGTCTTAAAAGGAAGATTGGTTGTATTGATGTTGCTACTCAAATGGGTAGGAAGAAGAAGATCGAGGATGATTATGTTACTGGGGAAGCGATCGGGCAAGGGAAGTTTGGATCGGTTTATTTGTGTAGGTCTAGGGTTAGTGGAGCGGAGTTTGCGTGTAAGACTTTGAAGAAAGGGGAGGAGACGGTTCATCGGGAGGTTGAGATAATGCAACATTTGTCTGGACATTCTGGGGTTGTGACGTTGCAAGCTGTTTATGAAGAAGCTGAGTGCTTTCATCTTGTGATGGAATTGTGCTCCGGGGGACGATTGATTGATCAAATGCTTAAGGACGGTCCATATTCGGAACAGCGGGCCGCTAATGTACTGAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGACATGGGAGTTGTCCACAGAGATATCAAACCTGAGAATATTTTGCTTACAAAATCAGGAAAATTAAAGCTAGCAGATTTTGGACTCGCCATGAGAATTTCGGAAGGTCAAAACTTGACAGGATTAGCTGGAAGCCCTGCATATGTTGCCCCTGAAGTATTATCGGGCAAATACTCTGAGAAGGTTGATATATGGAGCGCTGGAGTGCTCATGCATGCTCTGTTGGTTGGCTGTCTTCCATTTCAGGGAGATTCATTGGAAGCTGTTTTTGAGGCTATTAAGACTGTCAAATTAGACTTCCAAGCAGGGTTGTGGGAATCGATATCTAAACCTGCACGGGATCTTATAGGGAGAATGCTGACAAGAGATACTTCGGCCAGGATATCAGCTGATGAAGTACTTAGGCATCCATGGATTTTGTTCTACACCGCCCAATCAATGAAGATGCTGCCCATCAAAATAAAATTAAAGAATCAAATTGGTGTCACGAGCAGACAGCTTGTTGCCACACCAGAACCTAGGTTAGGAAGAAACATGATAGATAATGGCTCTGTTAGCGAGCTTCCATCCTCTGAAAGTTGCTATTCAGATGATCAGGATGAATGTGCGTTGATTGATGCACTTGCCACTGCAATTTCACATGTGAGGATATCTGAACCAAAGAGAACCAGGTTGTGTAGTCCTACCGGCCCCATAGTTCAGCAAGGTTCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1416 0.4421 MRKKRKGSETDDLTDLGGGTVLPLDHGSVGSSNLKSHYSLEDCCRLKKRCKEDVDTGAEPAAGSFKSRLAGIATAPPFGTSSLITPTRGLKRKIGCIDVATQMGRKKKIEDDYVTGEAIGQGKFGSVYLCRSRVSGAEFACKTLKKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDQMLKDGPYSEQRAANVLKEVMLVIKYCHDMGVVHRDIKPENILLTKSGKLKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLSGKYSEKVDIWSAGVLMHALLVGCLPFQGDSLEAVFEAIKTVKLDFQAGLWESISKPARDLIGRMLTRDTSARISADEVLRHPWILFYTAQSMKMLPIKIKLKNQIGVTSRQLVATPEPRLGRNMIDNGSVSELPSSESCYSDDQDECALIDALATAISHVRISEPKRTRLCSPTGPIVQQGSSNMKANNLCKAF* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1298 471 CDD STKc_CAMK 112 360 - -
Mal2g1298 471 SMART serkin_6 113 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1298 471 Pfam Protein kinase domain 113 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1298 471 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 27 463 - -
Mal2g1298 471 SUPERFAMILY Protein kinase-like (PK-like) 104 377 IPR011009 -
Mal2g1298 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Mal2g1298 471 Gene3D Transferase(Phosphotransferase) domain 1 104 402 - -
Mal2g1298 471 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Mal2g1298 471 ProSiteProfiles Protein kinase domain profile. 113 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g1298 471 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1298 Mal-Chr2 15574845 15578160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1298 113 361 EF-hand Containing Proteins AT1G50700 44.788 3.46e-78 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal2g1298 Pkinase 3.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1298 - - mtr:MTR_3g099767 863.988