Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1285 ATGGCGGAACCACCTCTTCCGGTTGAGGATCCTCCAATTCCAGTTATCGACGACGACGATGATGATGAGGACTACACTGATGATGGTCACGGTGATGGTGATGATACTATGGATGAATTGGAAGAAGAAACAAATGTGAATTCAGTGAACGTTGAAGCTAATGTTTTACCTGCAACTGCTGCGCGTATCGGTGAACTCACTCTTTCGTTTGAAGGAGAGGTTTACGTTTTTCCCGCTGTCACACATCAGAAGGTGCAAGCTGTTTTGCTGTTTTTGGGAGGACGTGATGCGCAGCCGGGCATGCCTTCAGTTGAACTACCATTTGATCAAAGTAACAGGGGCATGGGCATGGGCAATATTTCAAAGATTCCAAATCTTTCACGAAGAATAGCCTCCTTGGTCAGGTACCGTGAAAAACGCAAGGAAAGATGTTTTGACAAGAAAATTAGATACTCTGTGAGAAAAGAGGTGGCAGAAAGGATGCATCGGGAAAAGGGGCAGTTTGCACCCTTGAAGCAAAGCCCTGGTTCCTCTAGTTGGAATTCAGCAGGGGGTGCTGGTCAAGATGGCAGTCCTAATCCTGAATCTTTACGTAAATGTCAACATTGTGGAGTCAACGAAAACAATACTCCTGCAATGCGCCGCGGACCAGCTGGACCAAGAACTTTATGTAATGCATGCGGCCTCATGTGGGCCAACAAGGGGACACTCAGAGATCTCAGTAAGGGTGGAAGAATCCTTTCTATTGAGCAAAGACGTCCGGACCCTCCAGTTGATGTCAAGCCTACTGTTCATGAAGGGGAATTGTCTGTCACTGAAAATGAACAAGGTATTTCTGAAGAACCTTCCAAGACTATTGGTGCTGAAGGTTTGAATGATCATGCATTAAACCCTGGTGATGAGGAATTGTCTGAATCTGCAGAACACATAACAAACACACTGACATCTGTAATTGATCATTCGTCGGAAAATGATGATGAGCAGGAACCCGTGGTCGAGCTTTCTAATCCTTCAGATGCAGGAATGTCTAATCCTTCAGATACAGATATTGACATTCCTGGAAACTTTGATTAG 1074 0.4516 MAEPPLPVEDPPIPVIDDDDDDEDYTDDGHGDGDDTMDELEEETNVNSVNVEANVLPATAARIGELTLSFEGEVYVFPAVTHQKVQAVLLFLGGRDAQPGMPSVELPFDQSNRGMGMGNISKIPNLSRRIASLVRYREKRKERCFDKKIRYSVRKEVAERMHREKGQFAPLKQSPGSSSWNSAGGAGQDGSPNPESLRKCQHCGVNENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRILSIEQRRPDPPVDVKPTVHEGELSVTENEQGISEEPSKTIGAEGLNDHALNPGDEELSESAEHITNTLTSVIDHSSENDDEQEPVVELSNPSDAGMSNPSDTDIDIPGNFD* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1285 357 MobiDBLite consensus disorder prediction 270 306 - -
Mal2g1285 357 MobiDBLite consensus disorder prediction 171 189 - -
Mal2g1285 357 Gene3D - 193 254 IPR013088 GO:0006355|GO:0008270
Mal2g1285 357 ProSiteProfiles GATA-type zinc finger domain profile. 194 252 IPR000679 GO:0006355|GO:0043565
Mal2g1285 357 MobiDBLite consensus disorder prediction 1 38 - -
Mal2g1285 357 ProSiteProfiles CCT domain profile. 129 171 IPR010402 GO:0005515
Mal2g1285 357 SMART GATA_3 194 247 IPR000679 GO:0006355|GO:0043565
Mal2g1285 357 SMART tify_2 59 94 IPR010399 -
Mal2g1285 357 Pfam tify domain 66 93 IPR010399 -
Mal2g1285 357 MobiDBLite consensus disorder prediction 164 198 - -
Mal2g1285 357 PANTHER GATA TRANSCRIPTION FACTOR 28-LIKE ISOFORM X1 12 357 - -
Mal2g1285 357 CDD ZnF_GATA 199 243 IPR000679 GO:0006355|GO:0043565
Mal2g1285 357 Pfam GATA zinc finger 200 236 IPR000679 GO:0006355|GO:0043565
Mal2g1285 357 MobiDBLite consensus disorder prediction 319 357 - -
Mal2g1285 357 ProSitePatterns GATA-type zinc finger domain. 200 227 IPR000679 GO:0006355|GO:0043565
Mal2g1285 357 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 195 249 - -
Mal2g1285 357 MobiDBLite consensus disorder prediction 13 38 - -
Mal2g1285 357 ProSiteProfiles Tify domain profile. 59 94 IPR010399 -
Mal2g1285 357 Pfam CCT motif 129 169 IPR010402 GO:0005515
Mal2g1285 357 PANTHER GATA TRANSCRIPTION FACTOR 28 12 357 IPR045280 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1285 Mal-Chr2 15428288 15434767 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1285 65 243 Tify Gene Family AT1G51600 54.595 3.71e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal2g1285 CCT 3.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1285 - - gmx:100801328 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1285 2 15428288 15434767 Mal2g1285 2 15428288 15434767 ECH