Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1260 ATGGACTCGTTAGGTTACTCCTTGTTCTGTGGTGTTTGCGCAGCATCTATCACTCTTGTCGCTCTTGAGGTGATATGTACGAAGATATTTACGAACTTCCTTCCAAATATAATGATTCTTTCATGTATAATGATCCATGCAACTCTGCTATGTATGCCACCATCTATATTGAATCACTGGAATGGAGCAGAGATTATTGGAGGATATGATTTCTCTGGCATAGTTGAGCACGTGGATTGGTGGTCACCGACCATTATTACAAGTCATGATCGTGAGGCAGTTCATATTCCTAATCACAAGTTCACTGACAATGTTGTGAGAAATAATCCGACTCAGAAATCTCATTGGCATATCAAGAGTTACATTGCTATCAATCCCTTGGATGTTAACAAACTTACCAGTATACTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAGTGGAGCAGCAGAAATTGCACAGAAGGGTCTTTTTGGAAGACATCAATCCTGAAAACCAAGCTCTGAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTTGTTAGTCATCATCAAGCCCAGTTAGCCACTCCCATCCAGACAGTTGATGAACCTGCGGCATCTGACTCCAAAAGTGATGAAAATTTTGCAGGAGCATCAACCTCTCCGCCTTGTGTAAACTCCAAGGATAAGTCCAAGTCAAATTCTGATTCACAAAGTGTGGTATCTGAAACTTCTGCTACTTCTTCACAGTCAAAGCAAGATGAAGAGAAATCGTTGGTGCTATCATCATCAGTTAGGCCTCCCTTAGAAGAGAATATTGTTCTCGGGGTTGCACTTGAAGACTCAAAACAAACTCTTCCAAATGAGTAA 855 0.4117 MDSLGYSLFCGVCAASITLVALEVICTKIFTNFLPNIMILSCIMIHATLLCMPPSILNHWNGAEIIGGYDFSGIVEHVDWWSPTIITSHDREAVHIPNHKFTDNVVRNNPTQKSHWHIKSYIAINPLDVNKLTSILADMRKVLAKNPQVEQQKLHRRVFLEDINPENQALKEAILLDLLRVVSHHQAQLATPIQTVDEPAASDSKSDENFAGASTSPPCVNSKDKSKSNSDSQSVVSETSATSSQSKQDEEKSLVLSSSVRPPLEENIVLGVALEDSKQTLPNE* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1260 284 MobiDBLite consensus disorder prediction 207 255 - -
Mal2g1260 284 Pfam Mechanosensitive ion channel 64 159 IPR006685 GO:0016020|GO:0055085
Mal2g1260 284 MobiDBLite consensus disorder prediction 193 260 - -
Mal2g1260 284 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 235 IPR045042 -
Mal2g1260 284 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 224 282 IPR045042 -
Mal2g1260 284 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 235 - -
Mal2g1260 284 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 224 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1260 Mal-Chr2 15174598 15177022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1260 1 284 Mechanosensitive Ion Channel Family AT5G10490 44.937 6.04e-72 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1260 K22047 - gmx:100777815 261.922