Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1258 ATGCTATGTATGCCACCATCTATATTGAATGACTGGAATGCAACAAAGTTTCTAGGATATGATGTTTATGACATATTCAAGAGTTGGTGCTCACCAACCATTGTTCGAGATGATGATCGTGAGACAATTCATATCCCCAATCACAAGCTCACTGCCAATATTGTGAGAAATCAGAGTCAGAAATCTCATTGGCATATAGAAAGTTACATTACTATCGATAGCTTCGATGACATTAATGAAATTAAGAGTATCTTGGCTGATATGCGTGAGATTTTGGCTAAAAATCCTCAAGTGGAGCAGGAGAAATTGCACAAAAGGGTCTTTTTAGATGACATAAATCTTGAAGACGGTCTAAAGATATGTGTATCTTGCTTTGTGAAAAGTTCAGATTATGAAGAGTACCTCCGGGTTAAGGAGACAATCCTTTTGGATCTTCATGGAGTCGTCAGTCTTCATCGAGCTCGGTTAGTCACTCAGAGCAGCACAGTTCAGACAAAATAG 501 0.3852 MLCMPPSILNDWNATKFLGYDVYDIFKSWCSPTIVRDDDRETIHIPNHKLTANIVRNQSQKSHWHIESYITIDSFDDINEIKSILADMREILAKNPQVEQEKLHKRVFLDDINLEDGLKICVSCFVKSSDYEEYLRVKETILLDLHGVVSLHRARLVTQSSTVQTK* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1258 166 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 6 164 IPR045042 -
Mal2g1258 166 Pfam Mechanosensitive ion channel 33 153 IPR006685 GO:0016020|GO:0055085
Mal2g1258 166 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 6 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1258 Mal-Chr2 15148670 15150033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1258 6 164 Mechanosensitive Ion Channel Family AT5G10490 54.321 6.77e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1258 K22047 - gmx:100796022 191.815