Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1255 ATGAACACAAGCAAAGCCGAAGCAGAACGGTTACTGGAAATCGGCGAAGAGCTTCTACAGAAGCGAGATCTAAAAGGTTCACGAGAAATAGCGATTCTTGTTCAAGAAACCGAACCTCTTCTAGAAGGTTCCGATCAGATCCTCGCTATTGTTGACGTTCTTGAAGCAGCTGAGAAGCCTCTCAATCTCAACAACCACCACCTCGATTGGTACGCCATTCTTCAAATCGATCGAAATTCGCAAGATCTCAATCGCATTAAGAAACAGTATCGTACTCTTGCTCTTCTTCTGCATCCTGATAAGAATCCGTTTTCGTATGCGGAACTTGCGTTCAAACTCGTTTCTGATGCATGGGCCGTTTTGTCTGACCCGGTTCAAAAGGCTCAGTATGATAAGGGTTTTGAATTTGAGGATTTGGGGAATGGGAATGGAAATGTGAATTTTTGGACTGCATGTCCTTATTGTTATAATTTGTATGAGTATTCTAGGGTTTATGAGGGTTGTTGTTTGATGTGTCAGAATTGTAATAAATCGTTTCATGGTTCTTCGATTCCGTCTCTTCCGCCGATTGTGCCGGGACATGAAGCTTATTATGTTTCATGGGGAATGTTTCCGATGGGATTTGTTTTTGAGAGTTTAGAAAATGGTGGTGGTGGTGATTCTGCTACAAGGAAGCGATAG 681 0.4244 MNTSKAEAERLLEIGEELLQKRDLKGSREIAILVQETEPLLEGSDQILAIVDVLEAAEKPLNLNNHHLDWYAILQIDRNSQDLNRIKKQYRTLALLLHPDKNPFSYAELAFKLVSDAWAVLSDPVQKAQYDKGFEFEDLGNGNGNVNFWTACPYCYNLYEYSRVYEGCCLMCQNCNKSFHGSSIPSLPPIVPGHEAYYVSWGMFPMGFVFESLENGGGGDSATRKR* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1255 226 PRINTS DnaJ domain signature 106 126 IPR001623 -
Mal2g1255 226 PRINTS DnaJ domain signature 71 89 IPR001623 -
Mal2g1255 226 PRINTS DnaJ domain signature 90 105 IPR001623 -
Mal2g1255 226 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Mal2g1255 226 Gene3D DnaJ domain 55 144 IPR036869 -
Mal2g1255 226 SUPERFAMILY Chaperone J-domain 67 164 IPR036869 -
Mal2g1255 226 CDD DnaJ 69 123 IPR001623 -
Mal2g1255 226 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 211 - -
Mal2g1255 226 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Mal2g1255 226 Pfam DnaJ domain 69 131 IPR001623 -
Mal2g1255 226 SMART dnaj_3 68 126 IPR001623 -
Mal2g1255 226 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1255 Mal-Chr2 15121659 15122339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1255 2 222 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 52.500 3.28e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1255 - - mtr:MTR_3g100330 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2260 8 48871212 48872258 Mal2g1255 2 15121659 15122339 PCT