Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1254 ATGTTAATACAAAGTTCTCTTCTTAGTTCAGTTGAAGCTGGTCTATGTTATGTATATGATGATGGGAAAGATTTTCAATGTGACCGGATGCCTAGTGGTGAAACTTGGCAGGTTTGTCTGAAATGCAACACGAACCCTGTTGACTGGTGTAGAAAAGCTGAACCAATGGAAGGGGATAAAAGGAATGCTGATGATCCTTACAACTCAAACTGTATAAGAAGCTGTGGTCGACCGTCAACTGCAAGTATAATGACTGAAAATACTGCACCTAATTTGGTATACAGGAGAAAAAAGCTACGCAAGGGATCAATTGCCTCTCTTTTCAAGCTAGGGCCAAATGACGTGCAGACAAGTGCCAATTTTCCTTCAGTCATAAGTTCTTCTTTGCATTTATCATCACCTGAGGATCAAACAACTGGTTTTCCAGTTAAGCATCAAATTGAAATGGTCAAATATCCTACTCTGCCTTCTGTCCTTCTTGATGGAGTAGCTAAAGATACCACACAGAAAAAAATAGGTATCGACAGTGTTAATGATAGTTGCTCCTCTTCAAAGTCAAATATGGTACCTGTTTCAGATTCCTTAGAAACTGAGATGGATGACATTGGCGAATGCTCATCCTCCAGTTTAATGGTAATGGATGCCACAAGGGAAGATTTAACAGAAAAGGATTTCTGCATTAATATATTAAGAAGCCATGGACTTCTTACCACTGAAGATACTCTTACAGATAATGTGGTTTCCGTTGAAGATGCTGTTACCACTGGTAATAACTGTTGTTCCAGGTCATGCAAAATATGTGGTCATTTGGATAGTTCATTGAAGATGCTTTTATGTGATAATTGTGAAGATTCATATCATCCATCTTGCTACAATTCACGTTTGAAAAAAATACCAATTGATGAGTGGTTTTGTCATTCATGTCTTAGTAAAAGGCAGAAATTTCATAAGGAGACAATTATCAAATCACCACGTATCAAGAGTGGAATGGGGAAATGTAGAACTGTCTCAATTAAGGATGAAATGAATCCCATACTGTTGATGTTGAGAGATACTGAGCCATATACGACTGATGTGCGAGTTGGTAAAGGTTTTCAAGCAGCAATACCTGACTGGTCAGGCCCTGTAAAAAGTGATGAAGGCGACTTTCCAGAACCATTGGAAATTAATCCTTCAGAGTTTAATAGACTGCAGGAAGAGAATATGAGAAATCCAACTAGACTCAGTTCCATTGGCAATTGGCTTCAATGCCGAGAGGTTATAGACAAAACTAGTGAAATTATATGTGGAAAATGGCGCAGGGCTCCACTATTTGAAGTTCAAACCGATGACTGGGAGTGCTTCTGTGCTTTTCATTGGGATCCATCTCATGCTGATTGTGCTGTACCTCAGGAGGTGGAAACAGACGAGGTTCTGAAGCAACTGAAGTATATAGAAATGTTGAGGCCGCGACTTGCTGTGAAACGGAGAAAATCAGACTGCACAAATAATGGCAATTGA 1500 0.394 MLIQSSLLSSVEAGLCYVYDDGKDFQCDRMPSGETWQVCLKCNTNPVDWCRKAEPMEGDKRNADDPYNSNCIRSCGRPSTASIMTENTAPNLVYRRKKLRKGSIASLFKLGPNDVQTSANFPSVISSSLHLSSPEDQTTGFPVKHQIEMVKYPTLPSVLLDGVAKDTTQKKIGIDSVNDSCSSSKSNMVPVSDSLETEMDDIGECSSSSLMVMDATREDLTEKDFCINILRSHGLLTTEDTLTDNVVSVEDAVTTGNNCCSRSCKICGHLDSSLKMLLCDNCEDSYHPSCYNSRLKKIPIDEWFCHSCLSKRQKFHKETIIKSPRIKSGMGKCRTVSIKDEMNPILLMLRDTEPYTTDVRVGKGFQAAIPDWSGPVKSDEGDFPEPLEINPSEFNRLQEENMRNPTRLSSIGNWLQCREVIDKTSEIICGKWRRAPLFEVQTDDWECFCAFHWDPSHADCAVPQEVETDEVLKQLKYIEMLRPRLAVKRRKSDCTNNGN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1254 499 SUPERFAMILY FYVE/PHD zinc finger 249 313 IPR011011 -
Mal2g1254 499 SMART PHD_3 263 309 IPR001965 -
Mal2g1254 499 Pfam PHD-finger 264 310 IPR019787 -
Mal2g1254 499 ProSitePatterns Zinc finger PHD-type signature. 264 308 IPR019786 -
Mal2g1254 499 Gene3D - 412 477 - -
Mal2g1254 499 ProSiteProfiles Zinc finger PHD-type profile. 261 311 IPR019787 -
Mal2g1254 499 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 330 IPR013083 -
Mal2g1254 499 PANTHER HISTONE ACETYLTRANSFERASE 27 492 - -
Mal2g1254 499 PANTHER REMODELING AND SPACING FACTOR 1 27 492 - -
Mal2g1254 499 ProSiteProfiles Zinc finger CW-type profile. 408 468 IPR011124 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1254 264 312 C2H2 Transcription Factor Family AT3G01460 44.000 3.56e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal2g1254 PHD 9.1e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1254 - - gmx:100813057 759.599