LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g1251	ATGGCAAAGGCTAGGCTTAGTTCGCATCACAATGGCAATATTATTACTAGAAGCTTGTTTAAGATGATTATAATATTTTTACTTGCGTTCCTATTAATACAAAATTCCTCCACTCACCTTGTCCTTGCAAATTCTCACTATTCCAATATTGTGAAGTTCCTTCCTGGTTTCCAAGGACCCCTTCCCTTTGTACTTGAAACTGGGTACGTTGGAGTGGGTGAAACTGAAGCTGAACAAGATGAGATTGCTGCTGAACTGTTCTACTATTTTATAGAGTCTGAGAATAATCCTAAACAAGATCCTCTCTTGCTTTGGCTAACTGGTGGTCCTGGTTGCTCTGGCTTCTCTGGCCTTGCCTTTGAAATAGGTCCACTAACATTTAAAAACGAGGAATACAACGGGAGCTTACCAAATTTGATCTTGAGGCCACATTCATGGACAAAGGTGGCTAATATTATATTTTTGGATTTGCCTGTGGGTACTGGATTCTCTTATCCCAAAACAAAAAGTGCTGCTCATCAAAGCACTTGGAAGCTAGTTCACAATGCTCATCAATTTCTTAGGAAGTGGCTCATTAATCATCCAGAATTTATCTCAAATGAAGTGTACATTGCTGGTGACTCATACTCAGGCATTCCTGTCCCAATTATCGTTCAAGAAATTTCATATGGAAATGAAGGTGGCCTCCAACCATGGATAAATCTTCAGGGATACATACTAGGAAATCCCGTAACATCACTAGGTCACGACGATAATTACAGAATACCATTTAATCATGGCATGGGACTTATTTCTGATGAACTCTACGTGTCACTGCAAAAGAATTGTAGAGGCGAGTATACAAATATAGATTCCCAAAATGTATTTTGTCTAGAAAACATCCAGTCCTACCAAGAGACTATTTCAGGAATTTATACAGCTCATATTTTGGAACCGAACTGTGAGTTAGATTTGTTTAATCCAATGGAAGCTCATGGTAGGAGACTTCTTATTCACAAGGCCAACACTATACTTAAAATGCCACCTTTAAACTGTCGGGGAATTATAGGGAAGTGGAAGCGTTGTAATTATGACATACCTTTCAAGCATGAAATAGCTAGCAGCTTCGCATATCATGTAAATCTTAGCAGAAAAGGCTATCGTTCATTAATATACAGTGGGGATCATGACATGATAGTTCCATTTTTGGCGACTCAAGCGTGGATAAGATCTTTAAACTACTCCATTGTTGATGATTGGAGACAATGGTATTCTAATTCCCAAGTAGCAGGATACACGAGGACTTACTCAAATCGGATGACATTTGCAACTGTGAAGGGGGGAGGACATACGGCTCCAGAGTACAAACATGAAGAGTGCTTCACCATGTTCAATAGGTGGATATCTTATAAGCCACTCTAA	1401	0.3926	MAKARLSSHHNGNIITRSLFKMIIIFLLAFLLIQNSSTHLVLANSHYSNIVKFLPGFQGPLPFVLETGYVGVGETEAEQDEIAAELFYYFIESENNPKQDPLLLWLTGGPGCSGFSGLAFEIGPLTFKNEEYNGSLPNLILRPHSWTKVANIIFLDLPVGTGFSYPKTKSAAHQSTWKLVHNAHQFLRKWLINHPEFISNEVYIAGDSYSGIPVPIIVQEISYGNEGGLQPWINLQGYILGNPVTSLGHDDNYRIPFNHGMGLISDELYVSLQKNCRGEYTNIDSQNVFCLENIQSYQETISGIYTAHILEPNCELDLFNPMEAHGRRLLIHKANTILKMPPLNCRGIIGKWKRCNYDIPFKHEIASSFAYHVNLSRKGYRSLIYSGDHDMIVPFLATQAWIRSLNYSIVDDWRQWYSNSQVAGYTRTYSNRMTFATVKGGGHTAPEYKHEECFTMFNRWISYKPL*	467

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g1251	466	Gene3D	-	338	466	-	-
	Mal2g1251	466	Pfam	Serine carboxypeptidase	55	462	IPR001563	GO:0004185\|GO:0006508
	Mal2g1251	466	Gene3D	alpha/beta hydrolase	44	320	IPR029058	-
	Mal2g1251	466	PANTHER	1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE	348	464	-	-
	Mal2g1251	466	PANTHER	1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE	28	318	-	-
	Mal2g1251	466	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	348	464	IPR001563	GO:0004185\|GO:0006508
	Mal2g1251	466	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	28	318	IPR001563	GO:0004185\|GO:0006508
	Mal2g1251	466	SUPERFAMILY	alpha/beta-Hydrolases	51	465	IPR029058	-
	Mal2g1251	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	142	154	IPR001563	GO:0004185\|GO:0006508
	Mal2g1251	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	190	215	IPR001563	GO:0004185\|GO:0006508
	Mal2g1251	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	433	446	IPR001563	GO:0004185\|GO:0006508
	Mal2g1251	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	155	165	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g1251	Mal-Chr2	14980114	14989198	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g1251	49	86	Calmodulin-binding Proteins	AT2G22960	55.263	8.58e-08	50.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g1251	K16296		-	gmx:100792006	622.468