Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1240 ATGACCACATCCTCTTCCCATCTCTTATCTTCAAAGCCATATTCAAACAAATTAATCGTGGAAAGCGAAATGGAATTTGATGAACACGAACAAGACCAAGAGGAGGAGGAAGAAGAAGAAATGGGATTCCCTGTTACGCCGGTGGCATGTTACGACTCAGGTGTAAGGTCAAAAAATGGCGGCGTAATCGGTTCAGCAGACGGAGGAGCAAGCGGTGGTGGCAAAATTGGGCCCACAGGAACGGTTAGATACAAAGAATGTCAAAAGAATCACGCCGTTGGCATCGGTGGTCACGCCGTTGATGGATGTTGCGAGTTTTTAGCTGCTGGAGAAGAAGGAACACTGGAAGCCGTAATTTGCGCTGCTTGTAACTGTCACCGGAACTTTCACCGCAAAGAAATTGACGGTGAATTCACTTCACAGCGGCCTCAGCAGCACCACCACCACCAACATCAATTGTCACCTTACTACCACCGTGCAGTGCTGCCTCCTCCGCCTGGTTTCCACCACCACAGCTTGGTAACTCCACCGCTATCACAACATCGTCCGTTGGCTCTACCACCTGCTGCATCGAGTAGGGGATTCAGTAGAGAAGAAGATGACGTGTCAAATCCAAGCAGCAGCGGTGGTGGTGGTGGAAGTGGAATGAAGAAAAGGTTTAGAACAAAATTCACGCAGGAGCAAAAGGATAAGATGCTTGCATTTGCGGAGAAAATTGGGTGGAGAATTCAGAAGGAAGATGAAGGTGCAATTGAACAATTCTGTGCTGAGAATTTTATCAAGAGACATGTGCTTAAGGTTTGGATGCACAATAACAAGCACACTCTTGGTAAGAAACCCTAA 843 0.4733 MTTSSSHLLSSKPYSNKLIVESEMEFDEHEQDQEEEEEEEMGFPVTPVACYDSGVRSKNGGVIGSADGGASGGGKIGPTGTVRYKECQKNHAVGIGGHAVDGCCEFLAAGEEGTLEAVICAACNCHRNFHRKEIDGEFTSQRPQQHHHHQHQLSPYYHRAVLPPPPGFHHHSLVTPPLSQHRPLALPPAASSRGFSREEDDVSNPSSSGGGGGSGMKKRFRTKFTQEQKDKMLAFAEKIGWRIQKEDEGAIEQFCAENFIKRHVLKVWMHNNKHTLGKKP* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1240 280 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 84 133 IPR006456 -
Mal2g1240 280 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 79 279 - -
Mal2g1240 280 MobiDBLite consensus disorder prediction 1 43 - -
Mal2g1240 280 Pfam ZF-HD protein dimerisation region 82 134 IPR006456 -
Mal2g1240 280 SUPERFAMILY Homeodomain-like 202 278 IPR009057 -
Mal2g1240 280 MobiDBLite consensus disorder prediction 25 42 - -
Mal2g1240 280 Coils Coil 19 39 - -
Mal2g1240 280 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 79 279 - -
Mal2g1240 280 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 217 273 IPR006455 -
Mal2g1240 280 Gene3D - 202 277 - -
Mal2g1240 280 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 83 134 IPR006456 -
Mal2g1240 280 MobiDBLite consensus disorder prediction 1 17 - -
Mal2g1240 280 MobiDBLite consensus disorder prediction 139 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1240 Mal-Chr2 14823272 14824455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1240 82 276 ZF-HD Transcription Factor Family AT4G24660 53.571 1.52e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mal2g1240 ZF-HD_dimer 1.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1240 - - gmx:100820567 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g2297 8 49562247 49563041 Mal2g1240 2 14823272 14824455 PCT