Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1226 ATGAATTTGAATATGAATTTTGAAGCTATGAATAGAAGCTCATCAACAACAACATCCTCATCAGACTCATGTTCATCAGAATCAAATCCAACAAACCAAAACAAACTAGACAGAATCAAAGGTCCATGGAGTGCAGAAGAAGACAGAATTTTAACTCGACTAGTTGAACAACATGGAGCAAGAAACTGGTCACTCATCAGCCGTTACATAAAAGGTCGGTCCGGCAAGTCCTGTCGTCTCCGGTGGTGTAACCAGCTGAGCCCCACCGTGGAACACCGTCCATTTTCTTCACAAGAAGATGAAACAATCATAGCGGCGCATGCTCAATACGGTAACCGTTGGGCTACCATTGCAAGGCTTTTACCTGGTAGAACTGATAATGCTGTGAAGAATCATTGGAACTCTACGCTTAAGCGTAGAGCAACAAGTTGTGGTGGTGGTGGTGGTGGTTCTGTTACGGTTGCCGGAGCTGGCAACGAAGGTGGAAGTTGTTCTGGTCGGTTTGCTTTTCCGGTGGAAGATGATCCGTTGACTGCGTTGACTCTTGCTCCTCCGGGGAATGGTGTGGAAGATAGGGAGGAGATGGTTGCTGATCATCGGTTTCCTTCGCCGTCGCCGTCGCCGGAAAGTGTTCCGTCGGGGTTTTGGGATGTTATGAGAGGTGTTATTGCGAAGGAAGTTAGGGAATATGTTTCTTCTAATTTTTCTCATTCTCATAATTCTAGTTTTCATTAA 735 0.4558 MNLNMNFEAMNRSSSTTTSSSDSCSSESNPTNQNKLDRIKGPWSAEEDRILTRLVEQHGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSSQEDETIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRATSCGGGGGGSVTVAGAGNEGGSCSGRFAFPVEDDPLTALTLAPPGNGVEDREEMVADHRFPSPSPSPESVPSGFWDVMRGVIAKEVREYVSSNFSHSHNSSFH* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1226 244 PANTHER MYB TRANSCRIPTION FACTOR 1 228 - -
Mal2g1226 244 Gene3D - 39 91 - -
Mal2g1226 244 ProSiteProfiles Myb-like domain profile. 35 86 IPR001005 -
Mal2g1226 244 SMART sant 91 139 IPR001005 -
Mal2g1226 244 SMART sant 39 88 IPR001005 -
Mal2g1226 244 CDD SANT 42 84 IPR001005 -
Mal2g1226 244 Gene3D - 94 140 - -
Mal2g1226 244 SUPERFAMILY Homeodomain-like 37 133 IPR009057 -
Mal2g1226 244 MobiDBLite consensus disorder prediction 1 38 - -
Mal2g1226 244 PANTHER MYB PROTEIN-RELATED 1 228 - -
Mal2g1226 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 141 IPR017930 -
Mal2g1226 244 MobiDBLite consensus disorder prediction 1 41 - -
Mal2g1226 244 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Mal2g1226 244 CDD SANT 94 137 IPR001005 -
Mal2g1226 244 Pfam Myb-like DNA-binding domain 43 101 - -
Mal2g1226 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 90 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1226 Mal-Chr2 14417366 14418100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1226 28 150 MYB Transcription Factor Family AT4G37260 71.654 2.77e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal2g1226 Myb_DNA-bind_6 1.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1226 - - gmx:778051 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1226 2 14417366 14418100 Mal2g1226 2 14417366 14418100 ECH