Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1211 ATGGTGGCAAAAGCAGCATCAGCATCATACGAAGAGAGTCGCCGGAAAAGAATGGAAGAGAATCGGAAGAGAATGGAAGCTCTAAATCTCACCCAGCTCTCTCAATCTCTTCACAAATCATCTTCCCCCATTTCAAAACCTTCCAAACCTCGCAACCCCATCAAGAAAGAGCTCGTTGTTGTTCGACGCTCCGGCCGTGTTGCCAACATGCCTGCTCCCATTTACAAAGAAGTTCTTATTGATTCCGTTAAAATACCTAGAAATAGAATTTCAAGAGGAGGTTATGATAAGTACAGGGATTATTCGAAGCGGGTTTATGCTTCCGATGAAGCTAGAGTGGAAGCATTGGAGAAAGCGGATAAGCTGCTGTCTGATTTAGATTCGGATCATCCATACTTTGTTAAGTCTATGCTCCAATCTCACGTCACTGGTGGATTCTGGCTGGGCCTTCCAGTTCAATTCTGCAAGAAAAACCTTCCAAAACGGGACGAAGTGATGACTTTAATTGATGAGGATGGGAATGAGTCTCCTACAACATATCTGGCTCAAAAAACAGGACTTAGCGCTGGATGGAGAGGTTTCGCTATTGCTCATAACCTTGTTGATGGGGACGCTTTAATTTTTGAGTTAGTTAAACGCACTGCATTCAAGGTCTACATTATTAGAGTGAATGAGGGTGAACAGCACGAGTGA 693 0.4372 MVAKAASASYEESRRKRMEENRKRMEALNLTQLSQSLHKSSSPISKPSKPRNPIKKELVVVRRSGRVANMPAPIYKEVLIDSVKIPRNRISRGGYDKYRDYSKRVYASDEARVEALEKADKLLSDLDSDHPYFVKSMLQSHVTGGFWLGLPVQFCKKNLPKRDEVMTLIDEDGNESPTTYLAQKTGLSAGWRGFAIAHNLVDGDALIFELVKRTAFKVYIIRVNEGEQHE* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1211 230 SMART B3_2 133 224 IPR003340 GO:0003677
Mal2g1211 230 SUPERFAMILY DNA-binding pseudobarrel domain 126 224 IPR015300 -
Mal2g1211 230 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 3 226 IPR044837 -
Mal2g1211 230 CDD B3_DNA 131 222 IPR003340 GO:0003677
Mal2g1211 230 Gene3D - 108 226 IPR015300 -
Mal2g1211 230 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS03G0184500 3 226 - -
Mal2g1211 230 ProSiteProfiles B3 DNA-binding domain profile. 133 224 IPR003340 GO:0003677
Mal2g1211 230 MobiDBLite consensus disorder prediction 1 54 - -
Mal2g1211 230 MobiDBLite consensus disorder prediction 27 48 - -
Mal2g1211 230 Pfam B3 DNA binding domain 133 222 IPR003340 GO:0003677
Mal2g1211 230 MobiDBLite consensus disorder prediction 9 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1211 Mal-Chr2 14248592 14252683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1211 9 225 B3 DNA Binding Superfamily AT3G19184 55.856 2.94e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal2g1211 B3 4.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1211 - - gmx:100797091 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1211 2 14248592 14252683 Mal2g1211 2 14248592 14252683 ECH