Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal2g1194 | ATGGACTGTAACCAGTTAAAGTCATCCTCATCATCATCAGAGGATCAAATTGACATGATGTTGATGATGATGATGCAACTCCCTGAATTCTCTTCATCTAACGGTAATAATAACAACACCATCAATGAATTTCCACCCTCAGATCAAGAATTCTATGGCGCTTCTAACAATACACGTCCTCTTGCAGATTTAATAGATAACCCTCCTAATCCAATACCATGGTCTTCATCTTCATCATTCACACACTTACCCTTACAATCCACCACCACAAACACAAACACAATCTCTTTCACTAATAACAACTCTACACCATCAATATTCCAACAACAACAACAAACAACTCCGTTAATGTTTTCAAATTCGAGCAACGAGATTGCTGCGAATTCGAACCATTACGGTACTGCGTCGCCATCAGAGAAGCGAACCTCGATGGCGGCGATGAGGGAGATGATATTCAGAATAGCAGCTATGCAACCAATTTACATAGACCCTGAATCAGTAAAACCACCAAAGAGAAGAAACGTGAAGATTTCAAAAGATCCTCAGAGTATAGCAGCAAGACACAGAAGAGAAAGAATAAGCGAGAAAATAAGAATACTTCAAAGAATGGTGCCAGGTGGAACTAAGATGGATACTGCATCAATGTTGGATGAAGCTATTCATTATGTTAAGTTTCTCAAGACACAACTTAAGACATTGCAGGAACGTGCTTCAGGAGCCAACAATAACAGGACAGTTGCTGGTTCAGGGATAGGGTTCCCTGTTTCATTGCCTAAGCCTTACCAAGCTCTTAATGTTGATCATTATGGGTCATGA | 816 | 0.4007 | MDCNQLKSSSSSSEDQIDMMLMMMMQLPEFSSSNGNNNNTINEFPPSDQEFYGASNNTRPLADLIDNPPNPIPWSSSSSFTHLPLQSTTTNTNTISFTNNNSTPSIFQQQQQTTPLMFSNSSNEIAANSNHYGTASPSEKRTSMAAMREMIFRIAAMQPIYIDPESVKPPKRRNVKISKDPQSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKTLQERASGANNNRTVAGSGIGFPVSLPKPYQALNVDHYGS* | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal2g1194 | 271 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 177 | 226 | IPR011598 | GO:0046983 | |
Mal2g1194 | 271 | SMART | finulus | 183 | 232 | IPR011598 | GO:0046983 | |
Mal2g1194 | 271 | Pfam | Helix-loop-helix DNA-binding domain | 184 | 226 | IPR011598 | GO:0046983 | |
Mal2g1194 | 271 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 1 | 255 | IPR045843 | GO:0003700|GO:0006355 | |
Mal2g1194 | 271 | Gene3D | - | 176 | 246 | IPR036638 | GO:0046983 | |
Mal2g1194 | 271 | CDD | bHLH_AtIND_like | 178 | 236 | - | - | |
Mal2g1194 | 271 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 181 | 237 | IPR036638 | GO:0046983 | |
Mal2g1194 | 271 | MobiDBLite | consensus disorder prediction | 31 | 58 | - | - | |
Mal2g1194 | 271 | Coils | Coil | 216 | 243 | - | - | |
Mal2g1194 | 271 | PANTHER | BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN | 1 | 255 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal2g1194 | Mal-Chr2 | 14076757 | 14077572 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal2g1194 | 144 | 250 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G50330 | 77.570 | 9.79e-47 | 154 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Mal2g1194 | HLH | 1.1e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal2g1194 | - | - | gmx:100815041 | 266.159 |