Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1184 ATGGAAGAAGAAAGAGATTATTCAACAATAGGAAGCAACAACACTCCCCAAGAGAAGAAGCAGAAGCACAAACAACAAGAAGAGAAACAATTCAGAGGAATAAGGAAGAGAAAGTGGGGTAAGTGGGTAGCAGAAATAAGAGAACCAAACAAAAGATCAAGAATCTGGTTAGGTTCTTACATCACTCCGGTAGCCGCCGCACGCGCCTACGACACCGCCGTTTTCTGTCTGAGAGGTCCTACTGCTCGTCTTAATTTTCCCGAATTATTGTTTCAAGACGACGAAGAAAACAACGAAGGTTCTGTTCAACAAGGTAACATGTCTGCTGACTTAATACGCAAAAAAGCTACAAAAGTCGGTGCTAGAGTTGATGCTCTTCAAATTGCTCTTGATCAAGCTTCATCTCGTACCAATTCGGCTCAATTCAACTCTGATTTGAACGAGTTTCCAGAACCTGAAGATTATTAA 468 0.4167 MEEERDYSTIGSNNTPQEKKQKHKQQEEKQFRGIRKRKWGKWVAEIREPNKRSRIWLGSYITPVAAARAYDTAVFCLRGPTARLNFPELLFQDDEENNEGSVQQGNMSADLIRKKATKVGARVDALQIALDQASSRTNSAQFNSDLNEFPEPEDY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1184 155 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Mal2g1184 155 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Mal2g1184 155 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Mal2g1184 155 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Mal2g1184 155 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 13 154 - -
Mal2g1184 155 MobiDBLite consensus disorder prediction 1 31 - -
Mal2g1184 155 MobiDBLite consensus disorder prediction 17 31 - -
Mal2g1184 155 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Mal2g1184 155 MobiDBLite consensus disorder prediction 133 155 - -
Mal2g1184 155 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 13 154 - -
Mal2g1184 155 CDD AP2 31 89 IPR001471 GO:0003700|GO:0006355
Mal2g1184 155 PRINTS Ethylene responsive element binding protein signature 69 89 IPR001471 GO:0003700|GO:0006355
Mal2g1184 155 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1184 Mal-Chr2 13918946 13919413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1184 1 145 AP2-EREBP Transcription Factor Family AT1G46768 55.862 3.84e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal2g1184 AP2 3.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1184 K09286 - gmx:100801528 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1184 2 13918946 13919413 Mal2g1184 2 13918946 13919413 ECH