Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1178 ATGGCTCAACACTATAACTCAATGTTCCTTTTGGATACCTTGTACTGCTCAGAAGAACATTGGGAAGAACAAGATGAGTTAGAGTTTGAGTACAATAATGTTTCCTTAAACAACACAACAATAAACTCCACTCCAAGTTCTTTGTTAGAAATAGACATGTTTTGGGACGATGAAGAGTTGAAATCACTTCTCAACAAAGAACAACAAAACCCTCTTTACATCTTTCTCCAAAACAACCCTGTTTTGGAGAGTTCTCGCAGAGAATCTATTGAATGGATGCTGAAAGTGAATGCTCATTACTCCTTTTCAGCTCTAACAGCTGTTCTTGCTGTTAACTACCTTGATAGGTTTCTCTTCAGCTTTCGTTTTCAGAATGAGAAGCCATGGATGACTCAGCTTGCTGCTGTAGCTTGTCTTTCTCTTGCTGCTAAAATGGAAGAGACCCATGTTCCTCTTTTACTAGATCTTCAAGTTGAAGAGAGTAGATACTTGTTTGAAGCAAAGACGATAAAAAAGATGGAAATTTTGGTACTTTCAACTCTTGGGTGGAAGATGAGTCCAGCAACACCTCTTTCTTTTATCGATTATATCATAAGAAGACTTGGATTGAAAGATCATATTTGCTGGGAGTTTCTTAGGAGATGTGAAGGTGTTCTTCTCTCTGTCATTAGATCAGATTCAAAGTTTATGAGTTATCTACCTTCTGTTTTGGCAACTGCTACAATGGTACATGTTTTCAACAGCGTGGAGCCTAGTTTAGGAGATGAATACCAAAGCCAGCTTCTTGGTATTTTGGGAATCAACAAAGACAAGGTGGATGAATGTGAGAAGCTGATGTTGAAACTGTGGTCAGGGTATGAAGAGAGGAATCAATGCAACAAACGTAAGTTTGGGTCAATTCCAAGTAGTCCAAAAGGTGTAATGGATATGTCTTTTAGCTGTGATAATTCCAATGATTCATGGGCTATAGCACCAACATCTTCATTTTCATCTTCACCAGAGCCTTTGTCCAAGAAGATCAGAACTCAAGACCAGTTTCTATTAAACTCTTCATAG 1056 0.3826 MAQHYNSMFLLDTLYCSEEHWEEQDELEFEYNNVSLNNTTINSTPSSLLEIDMFWDDEELKSLLNKEQQNPLYIFLQNNPVLESSRRESIEWMLKVNAHYSFSALTAVLAVNYLDRFLFSFRFQNEKPWMTQLAAVACLSLAAKMEETHVPLLLDLQVEESRYLFEAKTIKKMEILVLSTLGWKMSPATPLSFIDYIIRRLGLKDHICWEFLRRCEGVLLSVIRSDSKFMSYLPSVLATATMVHVFNSVEPSLGDEYQSQLLGILGINKDKVDECEKLMLKLWSGYEERNQCNKRKFGSIPSSPKGVMDMSFSCDNSNDSWAIAPTSSFSSSPEPLSKKIRTQDQFLLNSS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1178 351 PANTHER CYCLIN D3.1 PROTEIN 31 341 - -
Mal2g1178 351 ProSitePatterns Cyclins signature. 86 117 IPR006671 -
Mal2g1178 351 PANTHER CYCLINS 31 341 IPR039361 -
Mal2g1178 351 Pfam Cyclin, N-terminal domain 66 186 IPR006671 -
Mal2g1178 351 Pfam Cyclin, C-terminal domain 189 314 IPR004367 -
Mal2g1178 351 Gene3D - 70 186 - -
Mal2g1178 351 Gene3D - 62 276 - -
Mal2g1178 351 SUPERFAMILY Cyclin-like 170 302 IPR036915 -
Mal2g1178 351 SUPERFAMILY Cyclin-like 54 185 IPR036915 -
Mal2g1178 351 SMART cyclin_7 91 179 IPR013763 -
Mal2g1178 351 SMART Cyclin_C_2 188 315 IPR004367 -
Mal2g1178 351 CDD CYCLIN 85 178 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1178 Mal-Chr2 13802082 13803424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1178 9 282 Core Cell Cycle Gene Families AT4G34160 52.920 3.26e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1178 K14505 - aprc:113874132 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1178 2 13802082 13803424 Mal5g3638 5 103211195 103212709 ECH
Mal2g1178 2 13802082 13803424 Mal1g0485 1 5604345 5606315 ECH
Mal2g1178 2 13802082 13803424 Mal2g1178 2 13802082 13803424 ECH